[Dune] Installation problem

Leidenberger Patrick Patrick.Leidenberger at psi.ch
Fri Jul 21 16:40:48 CEST 2006


Hi,

I try to install a parallel version dune on a cluster with alugrid 0.3, metis 4.0 and parmetis 3.1.

During the "dunecontrol all" process i get the following error:
...
g++ -g -O2 -o integration integration-integration.o -DUSE_STDARG -DHAVE_STDLIB_H
=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDARG_H=1 -DUSE_STDARG=1 -DMALLOC
_RET_VOID=1 -march=opteron -m64 -DUSE_STDARG -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1
 -DHAVE_UNISTD_H=1 -DHAVE_STDARG_H=1 -DUSE_STDARG=1 -DMALLOC_RET_VOID=1 -march=o
pteron -m64 -DUSE_STDARG -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_UNISTD_H=1 -
DHAVE_STDARG_H=1 -DUSE_STDARG=1 -DMALLOC_RET_VOID=1 -march=opteron -m64  -L/home
2/leidenberger/dune/dune-common/common -L/home2/leidenberger/dune/dune-grid/grid
 /home2/leidenberger/dune/dune-common/common/.libs/libcommon.a /home2/leidenberg
er/dune/dune-grid/grid/.libs/libgrid.a -L/opt/mpi/mpich-1.2.7-opteron/lib -L/hom
e2/leidenberger/extlib/ParMetis-3.1 -L/home2/leidenberger/extlib/ALUGrid-0.3/lib
 -lparmetis /home2/leidenberger/extlib/ALUGrid-0.3/lib/libalugrid.a -L/home2/lei
denberger/extlib/metis-4.0 -lmetis -lmpich -lpthread -lrt
/home2/leidenberger/extlib/ALUGrid-0.3/lib/libalugrid.a(alugrid_parallel.o)(.gnu
.linkonce.r._ZTVN3MPI2OpE+0x20): undefined reference to `MPI::Op::Init(void (*)(
void const*, void*, int, MPI::Datatype const&), bool)'
/home2/leidenberger/extlib/ALUGrid-0.3/lib/libalugrid.a(alugrid_parallel.o)(.gnu
.linkonce.r._ZTVN3MPI2OpE+0x28): undefined reference to `MPI::Op::Free()'
/home2/leidenberger/extlib/ALUGrid-0.3/lib/libalugrid.a(alugrid_parallel.o)(.gnu
.linkonce.t._ZN4PMPI7Request4WaitEv+0x7): In function `PMPI::Request::Wait()':
/opt/mpi/mpich-1.2.7-opteron/include/mpi2c++/request_inln.h:46: undefined refere
nce to `PMPI::Request::ignored_status'
...
(total message in appendix)

I think there is an problem with mpi and alugrid, but I have no idea where it comes form or how to fix it.

Can somebody give me a hit?

Thanks a lot

Patrick
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