[Dune] [#739] Linking Alberta lib with new dune 2.0

[Dune]

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A new Flyspray task has been opened.  Details are below. 

User who did this - Chensong Zhang (zhangcs) 

Attached to Project - Dune
Summary - Linking Alberta lib with new dune 2.0
Task Type - Bug Report
Category - Alberta
Status - Unconfirmed
Assigned To - 
Operating System - Unspecified / All
Severity - Low
Priority - Normal
Reported Version - 1.2
Due in Version - Undecided
Due Date - Undecided
Details - I recently changed to dune-grid release 2.0. And I use Alberta-2.0.1 with it. I compile Alberta and then Dune with gcc-4.4.1 on my Macbook Snow Leopard. 

I compile a code which compiles ok previously. I had the following error: 

============= 

CC -c testdriver.c
CC -o testdriver testdriver.o semi_lagrangian_inner_product.o  /Users/zhangcs/Packages/dune/dune-grid/dune/grid/.libs/libgrid.a /Users/zhangcs/Packages/dune/dune-common/dune/common/.libs/libcommon.a -L/usr/share/libpsurface/lib -lpsurface -L/Users/zhangcs/Packages/alberta-2.0.1/lib -lalberta_2d -lalberta_util -lstdc++
ld: warning: in /Users/zhangcs/Packages/alberta-2.0.1/lib/libalberta_2d.dylib, file is not of required architecture
ld: warning: in /Users/zhangcs/Packages/alberta-2.0.1/lib/libalberta_util.dylib, file is not of required architecture
Undefined symbols:
  "_get_fe_space", referenced from:
      Dune::Alberta::HierarchyDofNumbering<2>::createDofSpace(Dune::Alberta::MeshPointer<2> const&, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int const (&) [4], bool)in semi_lagrangian_inner_product.o
  "_get_dof_int_vec", referenced from:
      Dune::Alberta::DofVectorProvider<int>::get(fe_space const*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)in semi_lagrangian_inner_product.o
  "_alberta_alloc", referenced from:
      signed char* Dune::Alberta::memAlloc<signed char>(unsigned long)in semi_lagrangian_inner_product.o
  "_get_dof_uchar_vec", referenced from:
      Dune::Alberta::DofVectorProvider<unsigned char>::get(fe_space const*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)in semi_lagrangian_inner_product.o
  "_fill_macro_info", referenced from:
      Dune::Alberta::ElementInfo<2>::ElementInfo(Dune::Alberta::MeshPointer<2> const&, Dune::Alberta::MacroElement<2> const&, unsigned long)in semi_lagrangian_inner_product.o
  "_funcName", referenced from:
      double (*Dune::Alberta::memReAlloc<double [2]>(double (*) [2], unsigned long, unsigned long)) [2]in semi_lagrangian_inner_product.o
      int* Dune::Alberta::memReAlloc<int>(int*, unsigned long, unsigned long)in semi_lagrangian_inner_product.o
      signed char* Dune::Alberta::memReAlloc<signed char>(signed char*, unsigned long, unsigned long)in semi_lagrangian_inner_product.o
      signed char* Dune::Alberta::memAlloc<signed char>(unsigned long)in semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<unsigned char>::operator unsigned char*() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<double [2]>::operator double (*) [2]() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<int>::operator int*() constin semi_lagrangian_inner_product.o
  "_print_error_funcname", referenced from:
      Dune::Alberta::DofVectorPointer<unsigned char>::operator unsigned char*() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<double [2]>::operator double (*) [2]() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<int>::operator int*() constin semi_lagrangian_inner_product.o
  "_write_macro_data", referenced from:
      Dune::Alberta::MacroData<2>::write(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, bool) constin semi_lagrangian_inner_product.o
  "_write_macro_data_xdr", referenced from:
      Dune::Alberta::MacroData<2>::write(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, bool) constin semi_lagrangian_inner_product.o
  "_dof_free_bit", referenced from:
      void Dune::Alberta::DofVectorPointer<unsigned char>::forEach<Dune::AlbertaGridLevelProvider<2>::CalcMaxLevel>(Dune::AlbertaGridLevelProvider<2>::CalcMaxLevel&) constin semi_lagrangian_inner_product.o
      void Dune::Alberta::DofVectorPointer<int>::forEach<Dune::AlbertaGridHierarchicIndexSet<2, 2>::InitEntityNumber>(Dune::AlbertaGridHierarchicIndexSet<2, 2>::InitEntityNumber&) constin semi_lagrangian_inner_product.o
  "_check_and_get_mesh", referenced from:
      void Dune::Alberta::MeshPointer<2>::create<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory>(Dune::Alberta::MacroData<2> const&, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> const&)in semi_lagrangian_inner_product.o
  "_free_dof_int_vec", referenced from:
      Dune::Alberta::DofVectorProvider<int>::free(dof_int_vec*)   in semi_lagrangian_inner_product.o
  "_get_dof_real_d_vec", referenced from:
      Dune::Alberta::DofVectorProvider<double [2]>::get(fe_space const*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)in semi_lagrangian_inner_product.o
  "_print_error_msg_exit", referenced from:
      Dune::Alberta::DofVectorPointer<unsigned char>::operator unsigned char*() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<double [2]>::operator double (*) [2]() constin semi_lagrangian_inner_product.o
      Dune::Alberta::DofVectorPointer<int>::operator int*() constin semi_lagrangian_inner_product.o
  "_alloc_macro_data", referenced from:
      Dune::Alberta::MacroData<2>::create()      in semi_lagrangian_inner_product.o
  "_free_macro_data", referenced from:
      Dune::Alberta::MacroData<2>::release()      in semi_lagrangian_inner_product.o
  "_alberta_realloc", referenced from:
      double (*Dune::Alberta::memReAlloc<double [2]>(double (*) [2], unsigned long, unsigned long)) [2]in semi_lagrangian_inner_product.o
      int* Dune::Alberta::memReAlloc<int>(int*, unsigned long, unsigned long)in semi_lagrangian_inner_product.o
      signed char* Dune::Alberta::memReAlloc<signed char>(signed char*, unsigned long, unsigned long)in semi_lagrangian_inner_product.o
  "Dune::Alberta::MeshPointer<2>::Library<2>::projectionFactory", referenced from:
      void Dune::Alberta::MeshPointer<2>::create<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory>(Dune::Alberta::MacroData<2> const&, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> const&)in semi_lagrangian_inner_product.o
      void Dune::Alberta::MeshPointer<2>::create<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory>(Dune::Alberta::MacroData<2> const&, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> const&)in semi_lagrangian_inner_product.o
      node_projection* Dune::Alberta::MeshPointer<2>::initNodeProjection<Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> >(mesh*, macro_el*, int)in semi_lagrangian_inner_product.o
  "_free_dof_real_d_vec", referenced from:
      Dune::Alberta::DofVectorProvider<double [2]>::free(dof_real_d_vec*)in semi_lagrangian_inner_product.o
  "_compute_neigh_fast", referenced from:
      Dune::Alberta::MacroData<2>::finalize()      in semi_lagrangian_inner_product.o
  "_fill_elinfo", referenced from:
      Dune::Alberta::ElementInfo<2>::child(int) constin semi_lagrangian_inner_product.o
  "_free_mesh", referenced from:
      Dune::Alberta::MeshPointer<2>::release()       in semi_lagrangian_inner_product.o
  "_free_fe_space", referenced from:
      Dune::Alberta::HierarchyDofNumbering<2>::freeDofSpace(fe_space const*)   in semi_lagrangian_inner_product.o
  "_free_dof_uchar_vec", referenced from:
      Dune::Alberta::DofVectorProvider<unsigned char>::free(dof_uchar_vec*)in semi_lagrangian_inner_product.o
  "Dune::Alberta::MeshPointer<2>::Library<2>::boundaryCount", referenced from:
      void Dune::Alberta::MeshPointer<2>::create<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory>(Dune::Alberta::MacroData<2> const&, std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> const&)in semi_lagrangian_inner_product.o
      node_projection* Dune::Alberta::MeshPointer<2>::initNodeProjection<Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> >(mesh*, macro_el*, int)in semi_lagrangian_inner_product.o
      node_projection* Dune::Alberta::MeshPointer<2>::initNodeProjection<Dune::Alberta::ProjectionFactoryInterface<Dune::Alberta::DuneBoundaryProjection<2>, Dune::GridFactory<Dune::AlbertaGrid<2, 2> >::ProjectionFactory> >(mesh*, macro_el*, int)in semi_lagrangian_inner_product.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make: *** [all] Error 1

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