[Dune] Hades Parallel crash with parmetis

Aleksejs Fomins Aleksejs.Fomins at psi.ch
Wed Jun 30 13:21:24 CEST 2010


Dear Dune,

I have compiled ALUGrid-1.22 with ParMetis-3.1.1, then compiled Dune and 
Hades.
When I tried to launch a parallel job it crashed with anything more than 
1 core.

Then I recompiled ALUGrid with Metis-4.0, recompiled Dune and Hades and
parallel computations were working for 8 nodes.

What could be the reason?

The error is at the end of log.txt file
Also, when I run the job for the first time, I received this error2.txt

Regards,
Aleksey

Recourse specification:
---------------------------------------------------------------------------------------
uname -a
Linux felsim01 2.6.18-164.9.1.el5 #1 SMP Tue Dec 15 14:59:21 EST 2009 
x86_64 x86_64 x86_64 GNU/Linux

dune-common:
URL: https://svn.dune-project.org/svn/dune-common/trunk
Repository Root: https://svn.dune-project.org/svn/dune-common
Repository UUID: 419231ca-4411-0410-aba2-fc6cf8c4f609
Revision: 6048
Node Kind: directory
Schedule: normal
Last Changed Author: joe
Last Changed Rev: 6046
Last Changed Date: 2010-06-14 13:06:21 +0200 (Mon, 14 Jun 2010)

dune-grid:
URL: https://svn.dune-project.org/svn/dune-grid/trunk
Repository Root: https://svn.dune-project.org/svn/dune-grid
Repository UUID: f82f27de-4411-0410-b156-930a902cda50
Revision: 6777
Node Kind: directory
Schedule: normal
Last Changed Author: joe
Last Changed Rev: 6777
Last Changed Date: 2010-06-11 15:36:58 +0200 (Fri, 11 Jun 2010)


Currently Loaded Modulefiles:
 1) sge/ge62                      3) gcc/gcc-4.3.1                 5) 
hdf5/hdf5-1.8.4-gcc
 2) defaultenvironment            4) mpi/openmpi-1.3.3-gcc-4.3.1   6) 
paraview/3.6.1-osmesa

Alugrid version 1.22, compiled with these modules as all other programs

I run hertzianDipoleRadiatingIntoSphere.job
mpirun -np 8 ../../../hades3d/hades3d 
--option-file=hertzianDipoleRadiatingIntoSphere.job


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