[Dune] dune-grid-howto: compilation error in integration.cc

Tue Mar 30 09:16:43 CEST 2010

Dear Dune, there is a problem in the compilation of the dune-grid-howto,
patzicularly in integration.cc

cf. below:

versions used are:

Can you have a look ? Thanks and have a great day! Benedikt

pcp029897:dune-trunk oswald$ gcc --v
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5493~1/src/configure --disable- 
checking -enable-werror --prefix=/usr --mandir=/share/man --enable- 
languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/ 
$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/ 
lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic -- 
host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5493)

pcp029897:dune-trunk oswald$ svn info ./dune-common/
Path: dune-common
URL: https://svn.dune-project.org/svn/dune-common/trunk
Repository Root: https://svn.dune-project.org/svn/dune-common
Repository UUID: 419231ca-4411-0410-aba2-fc6cf8c4f609
Revision: 5950
Node Kind: directory
Schedule: normal
Last Changed Author: christi
Last Changed Rev: 5950
Last Changed Date: 2010-03-27 21:11:49 +0100 (Sat, 27 Mar 2010)

pcp029897:dune-trunk oswald$ svn info ./dune-grid
dune-grid/       dune-grid-howto/
pcp029897:dune-trunk oswald$ svn info ./dune-grid
Path: dune-grid
URL: https://svn.dune-project.org/svn/dune-grid/trunk
Repository Root: https://svn.dune-project.org/svn/dune-grid
Repository UUID: f82f27de-4411-0410-b156-930a902cda50
Revision: 6553
Node Kind: directory
Schedule: normal
Last Changed Author: christi
Last Changed Rev: 6553
Last Changed Date: 2010-03-29 21:42:56 +0200 (Mon, 29 Mar 2010)

pcp029897:dune-trunk oswald$ svn info ./dune-istl/
Path: dune-istl
URL: https://svn.dune-project.org/svn/dune-istl/trunk
Repository Root: https://svn.dune-project.org/svn/dune-istl
Repository UUID: 8c7282f0-4411-0410-8e4f-cdd3e049afb8
Revision: 1188
Node Kind: directory
Schedule: normal
Last Changed Author: sander
Last Changed Rev: 1187
Last Changed Date: 2010-03-26 18:57:24 +0100 (Fri, 26 Mar 2010)

pcp029897:dune-trunk oswald$ svn info ./dune-grid-howto/
Path: dune-grid-howto
URL: https://svn.dune-project.org/svn/dune-grid-howto/trunk
Repository Root: https://svn.dune-project.org/svn/dune-grid-howto
Repository UUID: 971b7fa1-7d12-0410-b1b7-9c127676b1f7
Revision: 302
Node Kind: directory
Schedule: normal
Last Changed Author: sander
Last Changed Rev: 302
Last Changed Date: 2010-03-28 20:23:53 +0200 (Sun, 28 Mar 2010)

================================================
mpicxx -DHAVE_CONFIG_H -I.  -I/Users/oswald/svnwork/dune-trunk/dune- 
common -I/Users/oswald/svnwork/dune-trunk/dune-grid -I/Users/oswald/ 
svnwork/dune-trunk/dune-istl -I. -DMPICH_IGNORE_CXX_SEEK -O2 - 
D_REENTRANT -I/Users/oswald/extlib/openmpi-1.3.3/include -DMPIPP_H - 
DENABLE_MPI=1 -DMPICH_IGNORE_CXX_SEEK -O2  -I/Users/oswald/svnwork/ 
dune-trunk/dune-common  -I/Users/oswald/svnwork/dune-trunk/dune-grid  - 
I/Users/oswald/svnwork/dune-trunk/dune-istl   -D_REENTRANT -I/Users/ 
oswald/extlib/openmpi-1.3.3/include -DMPIPP_H -DENABLE_MPI=1 -I/Users/ 
oswald/svnwork/dune-trunk/dune-common -DGRIDDIM=2 -DWORLDDIM=2 - 
DYASPGRID -I/usr/X11/include -D_THREAD_SAFE   -D_REENTRANT -I/Users/ 
oswald/extlib/openmpi-1.3.3/include -DMPIPP_H -DENABLE_MPI=1 -I/Users/ 
oswald/extlib/ALUGrid-1.22/include -I/Users/oswald/extlib/ALUGrid-1.22/ 
include/serial -I/Users/oswald/extlib/ALUGrid-1.22/include/ 
duneinterface -DENABLE_ALUGRID -I/Users/oswald/extlib/ALUGrid-1.22/ 
include/parallel -I/Users/oswald/svnwork/dune-trunk/dune-grid  -I/ 
Users/oswald/svnwork/dune-trunk/dune-istl -DMPICH_IGNORE_CXX_SEEK -O2 - 
MT integration-integration.o -MD -MP -MF .deps/integration- 
integration.Tpo -c -o integration-integration.o `test -f  
'integration.cc' || echo './'`integration.cc
In file included from integration.cc:9:
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfgridtype.hh:4:2: warning: #warning "<dune/grid/io/file/ 
dgfgridtype.hh> has been deprecated."
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfgridtype.hh:5:2: warning: #warning "Use your projects  
<dgfgridtype.hh> instead (generated by adding DUNE_OUTPUT_GRIDTYPE to  
configure.ac)"
In file included from /Users/oswald/svnwork/dune-trunk/dune-grid/dune/ 
grid/io/file/dgfparser/dgfgridtype.hh:90,
                  from integration.cc:9:
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/utility/ 
gridtype.hh:4:2: warning: #warning "<dune/grid/utility/gridtype.hh>  
has been deprecated."
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/utility/ 
gridtype.hh:5:2: warning: #warning "Use your projects <gridtype.hh>  
instead (generated by adding DUNE_OUTPUT_GRIDTYPE to configure.ac)"
In file included from /Users/oswald/svnwork/dune-trunk/dune-grid/dune/ 
grid/utility/gridtype.hh:268,
                  from /Users/oswald/svnwork/dune-trunk/dune-grid/dune/ 
grid/io/file/dgfparser/dgfgridtype.hh:90,
                  from integration.cc:9:
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/yaspgrid.hh:8:18:  
error: cstdint: No such file or directory
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfyasp.hh: In member function 'int  
Dune::DGFGridFactory<Dune::YaspGrid<dim> >::boundaryId(const  
Intersection&) const [with Intersection = Dune::Intersection<const  
Dune::YaspGrid<2>, Dune::YaspIntersection>, int dim = 2]':
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfparser.hh:526:   instantiated from 'void  
Dune::GridPtr<GridType>::initialize(Dune::DGFGridFactory<GridType>&)  
[with GridType = Dune::YaspGrid<2>]'
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfparser.hh:342:   instantiated from  
'Dune::GridPtr<GridType>::GridPtr(const std::string&,  
ompi_communicator_t*) [with GridType = Dune::YaspGrid<2>]'
integration.cc:76:   instantiated from here
/Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/io/file/dgfparser/ 
dgfyasp.hh:104: warning: 'boundaryId' is deprecated (declared at / 
Users/oswald/svnwork/dune-trunk/dune-grid/dune/grid/common/ 
intersection.hh:223)
make[2]: *** [integration-integration.o] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
--- Failed to build dune-grid-howto ---
Execution of dunecontrol terminated due to errors!

--------------------------------------------------------------------------------------------------------------------------------------------------------------------
Benedikt Oswald, Dr. sc. techn., dipl. El. Ing. ETH, www.psi.ch,  
Computational Accelerator Scientist, http://amas.web.psi.ch
Paul Scherrer  Institute (PSI), CH-5232 Villigen, Suisse, benedikt.oswald at psi.ch 
, +41(0)56 310 32 12

"Passion is required for any great work, and for the revolution  
passion and audacity are required in big doses.",
  Ernesto 'Che' Guevara, Letter to his parents.
--------------------------------------------------------------------------------------------------------------------------------------------------------------------