[Dune] Error building module

Marco Cisternino marco.cisternino at optimad.it
Tue Mar 25 15:18:57 CET 2014


Hi Christoph and Markus, 
when configure tries to verify the usability of dunegrid , it links like this: 

libtool: link: g++ -std=c++11 -o conftest -O3 -DNDEBUG -I/home/marco/workspace/lib/dune/2.3_new_subgrid/dune-common-2.3.0 -I/home/marco/workspace/lib/dune/2.3_new_subgrid/dune-geometry-2.3.0 -I/home/marco/ workspace/lib/dune/2.3_new_subgrid/dune-common-2.3.0 -I/home/marco/workspace/lib/dune/2.3_new_subgrid/dune-common-2.3.0 -I/home/marco/workspace/lib/dune/2.3_new_subgrid/dune-geometry-2.3.0 -I/home/marco/wo rkspace/lib/dune/2.3_new_subgrid/dune-geometry-2.3.0 -I/home/marco/workspace/lib/dune/2.3_new_subgrid/dune-grid-2.3.0 conftest.cpp /home/marco/workspace/lib/dune/2.3_new_subgrid/dune-grid-2.3.0/lib/.libs/ libdunegrid.a -L/opt/ALUGrid-1.52/lib -L/usr/local/lib -L/opt/openmpi/openmpi-1.6.4-gcc/lib -L/home/marco/workspace/lib/openmpi-1.6.4/opal/mca/hwloc/hwloc132/hwloc/src /opt/ALUGrid-1.52/lib/libalugrid.a -l metis /usr/local/lib/libmpi_cxx.so /usr/local/lib/libmpi.so /usr/local/lib/libopen-rte.so /usr/local/lib/libopen-pal.so /opt/openmpi/openmpi-1.6.4-gcc/lib/libmpi_cxx.so /opt/openmpi/openmpi-1.6.4-gcc/lib/l ibmpi.so -lrt -lnsl -lutil -ldl /home/marco/workspace/lib/dune/2.3_new_subgrid/dune-geometry-2.3.0/lib/.libs/libdunegeometry.a /home/marco/workspace/lib/dune/2.3_new_subgrid/dune-common-2.3.0/lib/.libs/lib dunecommon.a -llapack -lblas -pthread -Wl,-rpath -Wl,/opt/openmpi/openmpi-1.6.4-gcc/lib -Wl,-rpath -Wl,/opt/openmpi/openmpi-1.6.4-gcc/lib 

Inside that there's this string and it's causing me the problem : 

/usr/local/lib/libmpi_cxx.so /usr/local/lib/libmpi.so /usr/local/lib/libopen-rte.so /usr/local/lib/libopen-pal.so 

I don't want these libraries, but I don't know how to avoid them. 
These are the ones I want to use and they are in the libtool string: 
/opt/openmpi/openmpi-1.6.4-gcc/lib/libmpi_cxx.so /opt/openmpi/openmpi-1.6.4-gcc/lib/libmpi.so 

Here my configure flags 
CONFIGURE_FLAGS="CC=gcc CXX=g++ MPICC=/opt/openmpi/openmpi-1.6.4-gcc/bin/mpiCC --prefix=/opt/dune-2.3 --enable-parallel -enable-experimental-grid-extensions --disable-documentation --with-metis=/usr/local --with-parmetis=/usr/local --with-alugrid=/opt/ALUGrid-1.52 CFLAGS=\"-O3 -DNDEBUG\" CXXFLAGS=\"-O3 -DNDEBUG\" " 

Any hints? 

Thanks 

Bests, 
Marco 


-- 
----------------------------------------------- 
Marco Cisternino, PhD 
OPTIMAD Engineering s.r.l. 
Via Giacinto Collegno 18 
10143 Torino - Italy 
www.optimad.it 
marco.cisternino at optimad.it 
+39 011 19719782 
----------------------------------------------- 

----- Messaggio originale -----

Da: dune-request at dune-project.org 
A: dune at dune-project.org 
Inviato: Martedì, 25 marzo 2014 12:00:01 
Oggetto: Dune Digest, Vol 105, Issue 15 

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Today's Topics: 

1. Error building module (Marco Cisternino) 
2. Re: Error building module (Christoph Gr?ninger) 
3. Re: Error building module (Markus Blatt) 

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