[Dune] STD Thread that can not be run on Cray XC30 interactively crashed build process ?

[Benedikt Oswald]

Dear Dune,

I am currently trying to install Dune on a Cray XC30 & the build process
terminates
when testing for std threads (cf. output below) I have the impression
that it wants
to run the test which is not possible during the build process.

How can I prevent the build system from trying to run this test ?
Are there other tests that I should prevent from running ?

Greetings & thanks,

Benedikt

================================================================
dune: trunk version
gcc 4.9.2
cray libsci 13.0.1
cray mpich 7.1.1



================================================================
performing C++ SOURCE FILE Test STDTHREAD_WORKS failed with the
following output:
Change Dir:
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp

Run Build Command:/usr/bin/gmake "cmTryCompileExec3977336724/fast"
/usr/bin/gmake -f CMakeFiles/cmTryCompileExec3977336724.dir/build.make
CMakeFiles/cmTryCompileExec3977336724.dir/build
gmake[1]: Entering directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_progress_report
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CMakeFiles
1
Building CXX object CMakeFiles/cmTryCompileExec3977336724.dir/src.cxx.o
/opt/cray/craype/2.2.1/bin/CC    -Wall -O2
-I/users/boswald/extlib/superludist/3.3/cray-mpich/7.1.1/gcc/4.9.2/SRC
-std=c++11  -DSTDTHREAD_WORKS   -o
CMakeFiles/cmTryCompileExec3977336724.dir/src.cxx.o -c
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/src.cxx
Linking CXX executable cmTryCompileExec3977336724
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_link_script
CMakeFiles/cmTryCompileExec3977336724.dir/link.txt --verbose=1
/opt/cray/craype/2.2.1/bin/CC   -Wall -O2
-I/users/boswald/extlib/superludist/3.3/cray-mpich/7.1.1/gcc/4.9.2/SRC
-std=c++11  -DSTDTHREAD_WORKS   
CMakeFiles/cmTryCompileExec3977336724.dir/src.cxx.o  -o
cmTryCompileExec3977336724 -rdynamic
gmake[1]: Leaving directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'

Return value: FAILED_TO_RUN
Source file was:

      #include <thread>

      void dummy() {}

      int main() {
        std::thread t(dummy);
        t.join();
      }
   
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeError.log
lines 1-26/26 (END)



================

Determining if files pthread.h exist passed with the following output:
Change Dir:
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp

Run Build Command:/usr/bin/gmake "cmTryCompileExec2957165257/fast"
/usr/bin/gmake -f CMakeFiles/cmTryCompileExec2957165257.dir/build.make
CMakeFiles/cmTryCompileExec2957165257.dir/build
gmake[1]: Entering directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_progress_report
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CMakeFiles
1
Building C object
CMakeFiles/cmTryCompileExec2957165257.dir/CheckIncludeFiles.c.o
/opt/cray/craype/2.2.1/bin/cc    -o
CMakeFiles/cmTryCompileExec2957165257.dir/CheckIncludeFiles.c.o   -c
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CheckIncludeFiles.c
Linking C executable cmTryCompileExec2957165257
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_link_script
CMakeFiles/cmTryCompileExec2957165257.dir/link.txt --verbose=1
/opt/cray/craype/2.2.1/bin/cc      
CMakeFiles/cmTryCompileExec2957165257.dir/CheckIncludeFiles.c.o  -o
cmTryCompileExec2957165257 -rdynamic
gmake[1]: Leaving directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'


Determining if the pthread_create exist passed with the following output:
Change Dir:
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp

Run Build Command:/usr/bin/gmake "cmTryCompileExec3201665806/fast"
/usr/bin/gmake -f CMakeFiles/cmTryCompileExec3201665806.dir/build.make
CMakeFiles/cmTryCompileExec3201665806.dir/build
gmake[1]: Entering directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_progress_report
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CMakeFiles
1
Building C object
CMakeFiles/cmTryCompileExec3201665806.dir/CheckSymbolExists.c.o
/opt/cray/craype/2.2.1/bin/cc    -o
CMakeFiles/cmTryCompileExec3201665806.dir/CheckSymbolExists.c.o   -c
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CheckSymbolExists.c
Linking C executable cmTryCompileExec3201665806
/apps/daint/cmake/2.8.12.2/bin/cmake -E cmake_link_script
CMakeFiles/cmTryCompileExec3201665806.dir/link.txt --verbose=1
/opt/cray/craype/2.2.1/bin/cc      
CMakeFiles/cmTryCompileExec3201665806.dir/CheckSymbolExists.c.o  -o
cmTryCompileExec3201665806 -rdynamic
gmake[1]: Leaving directory
`/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp'

File
/scratch/daint/boswald/gitwork/dune-common/build-cmake/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
/* */
#include <pthread.h>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef pthread_create
  return ((int*)(&pthread_create))[argc];
#else
  (void)argc;
  return 0;
#endif
}







-- 
------------------------------------------------------------------------------------------------
Dr. sc. techn. Benedikt Oswald - first engineer - LSPR AG - phone - +41 43 366 90 74
Technoparkstrasse 1, CH-8005 Zürich, benedikt.oswald at lspr.ch - labor vincit omnia improbus
------------------------------------------------------------------------------------------------