[Dune] Dune install issue

Wed Nov 4 13:44:59 CET 2015

Please look at the cmake log files. They contain the failing command
and furter details. We can't do magics, but if you send the
corresponding lines, someone might have an answer.

Ciao
Christian

On Wed, Nov 04, 2015 at 11:13:53AM +0000, Dodwell, Timothy wrote:
> Hi Eike,
> 
> Thanks for your reply. I have install gcc with home-brew, (but the name had changed in /usr/bin). However if I take your suggestion or use the correct name, I get the following error
> 
> Check for working C compiler: /usr/bin/clang
> -- Check for working C compiler: /usr/bin/clang -- broken
> CMake Error at /usr/local/Cellar/cmake/3.3.2/share/cmake/Modules/CMakeTestCCompiler.cmake:61 (message):
>   The C compiler "/usr/bin/clang" is not able to compile a simple test
>   program.
> 
> This suggest that the C compiler is not working correctly, but if I test it with a little hello world c file it works fine.
> 
> Cheers
> 
> Tim
> 
> 
> Dr Tim Dodwell
> Lecturer in Engineering Mathematics
> Rm 221 - Harrison Building
> College of Engineering, Mathematics & Physical Sciences
> University of Exeter
> Exeter
> Devon
> EX4 4PY
> 
> mail: t.dodwell(at)exeter.ac.uk
> tel: +44 (0)1392 725899
> mob: +44 (0)7745 622870
> web: http://emps.exeter.ac.uk/engineering/staff/td336
> Papers and Pre-prints: @Research-Gate
> Citations: @Google-Scholar
> 
> This email and any attachment may contain information that is confidential, privileged, or subject to copyright, and which may be exempt from disclosure under applicable legislation. It is intended for the addressee only. If you received this message in error, please let me know and delete the email and any attachments immediately. The University will not accept responsibility for the accuracy/completeness of this email and its attachments.
> 
> ________________________________________
> From: Eike Mueller <E.Mueller at bath.ac.uk>
> Sent: 04 November 2015 10:20
> To: Dodwell, Timothy
> Cc: DUNE Liste
> Subject: Re: Dune install issue
> 
> Hi Tim (I copied this also to the DUNE list),
> 
> DUNE doesn’t find the c++ compiler that you set in the opts file. There you specified that it is "gcc-mp-4.9/g++-mp-4.9”, i.e. the gnu compiler. gcc is probably not part of your MAC installation (default compiler is clang), so you will have to re-install it e.g. via homebrew.
> 
> Having said that, I actually compile DUNE with clang on my macbook, and that worked fine. I currently use:
> 
> -DCMAKE_C_COMPILER=clang
> -DCMAKE_CXX_COMPILER=clang++
> -DCMAKE_Fortran_COMPILER=gfortran
> 
> You might not need the last line - maybe someone from the DUNE list can comment on this?
> 
> Thanks,
> 
> Eike
> 
> > On 4 Nov 2015, at 09:57, Dodwell, Timothy <T.Dodwell at exeter.ac.uk> wrote:
> >
> > <release.opts>
> 
> Hi Eike,
> 
> Hope you are well. I had some issues with my mac, which required me to reinstall OS-X. I am now trying to reinstall dune. I save my .opts file (Which I have attached). But get the following error.
> 
> Any Ideas?
> 
> Cheers
> 
> Tim
> 
> CMAKE_FLAGS="  -DDUNE_SYMLINK_TO_SOURCE_TREE=1"  # add symlinks back to source directory (called src_dir)
> CMAKE_FLAGS+=" -DCMAKE_C_COMPILER=gcc-mp-4.9"
> CMAKE_FLAGS+=" -DCMAKE_CXX_COMPILER=g++-mp-4.9"
> CMAKE_FLAGS+=" -DCMAKE_C_FLAGS='-Wall -march=native -Wa,-q'"
> CMAKE_FLAGS+=" -DCMAKE_CXX_FLAGS='-Wall -march=native -Wa,-q -fvisibility-inlines-hidden'"
> CMAKE_FLAGS+=" -DCMAKE_C_FLAGS_DEBUG='-O0 -g3'"
> CMAKE_FLAGS+=" -DCMAKE_CXX_FLAGS_DEBUG='-O0 -g3'"
> CMAKE_FLAGS+=" -DCMAKE_C_FLAGS_RELEASE='-O3 -g0 -ffast-math -funroll-loops'"
> CMAKE_FLAGS+=" -DCMAKE_CXX_FLAGS_RELEASE='-O3 -g0 -ffast-math -funroll-loops'"
> CMAKE_FLAGS+=" -DCMAKE_BUILD_TYPE=Release" # set this to Debug for debugging
> CMAKE_FLAGS+=" -DUG_ROOT=$HOME/git_workspace/ug"
> CMAKE_FLAGS+=" -DCMAKE_DISABLE_FIND_PACKAGE_UMFPack=1"
> 
> 
> Tims-MBP:dune timdodwell$ ./dune-common/bin/dunecontrol --builddir=$PWD/build/release --opts=release.opts all
> WARNING: could not find module dune-alugrid,
>        module is also unknown to pkg-config.
>        Maybe you need to adjust PKG_CONFIG_PATH!
>        dune-alugrid is suggested by dune-pdelab
> Skipping dune-alugrid!
> --- going to build dune-common dune-geometry dune-grid dune-istl dune-localfunctions dune-typetree dune-pdelab dune-pdelab-howto  ---
> --- calling all for dune-common ---
> --- calling vcsetup for dune-common ---
> --- calling autogen for dune-common ---
> Skipping dune-autogen because of CMake
> --- calling configure for dune-common ---
> find: dune: No such file or directory
> cmake -DCMAKE_MODULE_PATH=""  -DCMAKE_DISABLE_FIND_PACKAGE_MPI=FALSE -DDUNE_SYMLINK_TO_SOURCE_TREE=1 -DCMAKE_C_COMPILER=gcc-mp-4.9 -DCMAKE_CXX_COMPILER=g++-mp-4.9 -DCMAKE_C_FLAGS='-Wall -march=native -Wa,-q' -DCMAKE_CXX_FLAGS='-Wall -march=native -Wa,-q -fvisibility-inlines-hidden' -DCMAKE_C_FLAGS_DEBUG='-O0 -g3' -DCMAKE_CXX_FLAGS_DEBUG='-O0 -g3' -DCMAKE_C_FLAGS_RELEASE='-O3 -g0 -ffast-math -funroll-loops' -DCMAKE_CXX_FLAGS_RELEASE='-O3 -g0 -ffast-math -funroll-loops' -DCMAKE_BUILD_TYPE=Release -DUG_ROOT=/Users/timdodwell/git_workspace/ug -DCMAKE_DISABLE_FIND_PACKAGE_UMFPack=1 "/Users/timdodwell/git_workspace/dune/dune-common"
> -- The C compiler identification is unknown
> -- The CXX compiler identification is unknown
> CMake Error at CMakeLists.txt:2 (project):
>   The CMAKE_C_COMPILER:
> 
>     gcc-mp-4.9
> 
>   is not a full path and was not found in the PATH.
> 
>   Tell CMake where to find the compiler by setting either the environment
>   variable "CC" or the CMake cache entry CMAKE_C_COMPILER to the full path to
>   the compiler, or to the compiler name if it is in the PATH.
> 
> 
> CMake Error at CMakeLists.txt:2 (project):
>   The CMAKE_CXX_COMPILER:
> 
>     g++-mp-4.9
> 
>   is not a full path and was not found in the PATH.
> 
>   Tell CMake where to find the compiler by setting either the environment
>   variable "CXX" or the CMake cache entry CMAKE_CXX_COMPILER to the full path
>   to the compiler, or to the compiler name if it is in the PATH.
> 
> 
> -- Configuring incomplete, errors occurred!
> See also "/Users/timdodwell/git_workspace/dune/build/release/dune-common/CMakeFiles/CMakeOutput.log".
> See also "/Users/timdodwell/git_workspace/dune/build/release/dune-common/CMakeFiles/CMakeError.log".
> --- Failed to build dune-common ---
> Terminating dunecontrol due to previous errors!
> Tims-MBP:dune timdodwell$
> 

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-- 
Prof. Dr. Christian Engwer 
Institut für Numerische und Angewandte Mathematik
Fachbereich Mathematik und Informatik der Universität Münster
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