[Dune] a problem with ALUGrid and Metis
Arya Fallahi
arya.fallahi at gmail.com
Mon Jul 5 15:34:14 CEST 2021
Hi again Simon,
when I add the following lines to the opt file:
-DMETIS_INCLUDE_DIR=/Users/afallahi/Documents/library/metis-5.1/include \
-DMETIS_API_VERSION=5.1
the message changes to the following:
Could NOT find METIS (missing: METIS_LIBRARY) (found version "5.1")
then I also tried giving the METIS_LIBRARY flag through the following line:
-DMETIS_LIBRARY=/Users/afallahi/Documents/library/metis-5.1/lib
that could not find metis message disappears but at the end I get the
following error message when I want to build my module:
[ 50%] Linking CXX executable leist-fedc
ld: can't map file, errno=22 file
'/Users/afallahi/Documents/library/metis-5.1/lib' for architecture x86_64
collect2: error: ld returned 1 exit status
make[2]: *** [src/leist-fedc] Error 1
make[1]: *** [src/CMakeFiles/leist-fedc.dir/all] Error 2
make: *** [all] Error 2
--- Failed to build leist ---
Does it help at all?
Regards,
Arya
On Mon, Jul 5, 2021 at 3:26 PM Arya Fallahi <arya.fallahi at gmail.com> wrote:
> Hi Simon,
>
> I already see the METIS Found when dune-common is configured. In the log
> file, I see the following lines during configuring dune-common:
>
> -- Found METIS: /Users/afallahi/Documents/library/metis-5.1/lib/libmetis.a
> (found version "5.1")
>
> -- The following OPTIONAL packages have been found:
>
>
> * LATEX
>
> * LatexMk
>
> * BLAS, fast linear algebra routines
>
> * LAPACK, fast linear algebra routines
>
> * QuadMath, GCC Quad-Precision Math Library, <
> https://gcc.gnu.org/onlinedocs/libquadmath>
>
> * Inkscape, converts SVG images, <www.inkscape.org>
>
> To generate the documentation with LaTeX
>
> * Threads, Multi-threading library
>
> * PkgConfig, Unified interface for querying installed libraries
>
> To find Dune module dependencies
>
> * METIS, Serial Graph Partitioning
>
> * MPI, Message Passing Interface library
>
> Parallel programming on multiple processors
>
> * Python3
>
> Things go fine until dune-alugrid is being configured where I suddenly see
> the following message:
>
> Could NOT find METIS (missing: METIS_LIBRARY METIS_INCLUDE_DIR
> METIS_API_VERSION)
>
> I am using dune-common, dune-grid, dune-geometry and of course
> dune-alugrid.
>
> I did a search and I have only one FindMetis.cmake which is in the
> dune-common folder.
>
> Actually I was firstly using -DMETIS_DIR but later saw that in dune
> website using -DMETIS_ROOT is advised and I changed to that and the correct
> one is metis-5.1.
>
> I always run dunecontrol from scratch.
>
> My guess is that I should somehow give the above three variables manually
> but I do not know how to do that.
>
> I just cloned the dune modules from git repository and I am running the
> code on a mac.
>
> I hope it helps.
>
> Regards,
>
> Arya
>
> On Mon, Jul 5, 2021 at 1:52 PM Simon Praetorius <
> simon.praetorius at tu-dresden.de> wrote:
>
>> ok, I think I need more information about your setup, to find the error.
>> In your first cmake output log, it says: METIS Found (see the section "The
>> following OPTIONAL packages have been found:...").
>>
>> - You should see this METIS Found output already when you configure
>> dune-common.
>> - If in the same cmake output it first says "Found" and then "Not found",
>> then something is wrong.
>> - Which dune modules are you using? The `FindMETIS.cmake` file comes from
>> dune-common. Maybe there is another module conflicting with this?
>> - In your first mail, you wrote something like
>> "-DMETIS_DIR=/usr/local/Cellar/metis/5.1.0", in your last mail
>> "-DMETIS_ROOT=/Users/afallahi/Documents/library/metis-5.1". Maybe something
>> got mixed up?
>> - You could try to make a clean rebuild, i.e., remove all build
>> directories and run dunecontrol from the start:
>>
>> dunecontrol exec rm -rf build-cmake # to delete in ALL found dune modules
>> the folder build-cmake (the default cmake build folder)
>>
>> Best, Simon
>> Am 05.07.21 um 11:13 schrieb Arya Fallahi:
>>
>> Dear Simon,
>>
>> thank you very much for your email and answer to my question.
>>
>> I checked your branch and did exactly the same thing as your changes in
>> my alugrid but it still does not work.
>>
>> The strange thing I see now is that during compilation, first metis is
>> found:
>>
>> Found METIS: /Users/afallahi/Documents/library/metis-5.1/lib/libmetis.a
>> (found version "5.1")
>>
>> but afterward I see the following message:
>>
>> -- Could NOT find METIS (missing: METIS_LIBRARY METIS_INCLUDE_DIR
>> METIS_API_VERSION)
>>
>> I am now enabling the metis support in my opts file using
>>
>> -DMETIS_ROOT=/Users/afallahi/Documents/library/metis-5.1
>>
>> Is there anything else I should do?
>>
>> Again thanks a lot for your help and best regards,
>>
>> Arya
>>
>> On Sat, Jul 3, 2021 at 8:49 PM Simon Praetorius <
>> simon.praetorius at tu-dresden.de> wrote:
>>
>>> Dear Arya,
>>>
>>> in ALUGrid, METIS is disabled additionally by a variable ALUGRID_DISABLE_METIS
>>> that is set to true by default (I don't know why, maybe the developers can
>>> answer) and also you have to set METIS flags on your cmake target to get it
>>> properly enabled, by using `dune_add_mets_flags(<target>)`with `<target`
>>> your cmake target name (e.g. an executable).
>>>
>>> I suggest, you try out the branch bugfix/cmake-add-metis-flags that I
>>> have uploaded quiet recently, so solve these shortcoming with METIS in
>>> ALUGrid.
>>>
>>> Best regards,
>>> Simon
>>>
>>>
>>> Am 02.07.21 um 19:16 schrieb Arya Fallahi:
>>>
>>> Dear Dune,
>>>
>>> I am having a trouble with installing ALUGrid with support metis. In my
>>> opts file I write the following to tell ALUGrid the location of metis:
>>>
>>> CMAKE_FLAGS="
>>>
>>> -DCMAKE_CXX_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/g++
>>> \
>>>
>>> -DCMAKE_CXX_FLAGS='-O3' \
>>>
>>> -DCMAKE_C_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/gcc \
>>>
>>> -DCMAKE_C_FLAGS='-O3' \
>>>
>>> -DDUNE_GRID_GRIDTYPE_SELECTOR=ON \
>>>
>>> -DMETIS_DIR=/usr/local/Cellar/metis/5.1.0
>>>
>>> "
>>>
>>> then, during the compilation it seems metis is found:
>>>
>>> --- calling all for dune-alugrid ---
>>>
>>> --- calling vcsetup for dune-alugrid ---
>>>
>>> --- calling cmake for dune-alugrid ---
>>>
>>> ----- using default flags $CMAKE_FLAGS from
>>> /Users/afallahi/Documents/codes/leist.opts -----
>>>
>>> WARNING: could not find module 'dune-uggrid',
>>>
>>> module is also unknown to pkg-config.
>>>
>>> Maybe you need to adjust PKG_CONFIG_PATH!
>>>
>>> 'dune-uggrid' is suggested by dune-grid
>>>
>>> Skipping 'dune-uggrid'!
>>>
>>> cmake -DCMAKE_CXX_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/g++
>>> -DCMAKE_CXX_FLAGS='-O3'
>>> -DCMAKE_C_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/gcc
>>> -DCMAKE_C_FLAGS='-O3' -DDUNE_GRID_GRIDTYPE_SELECTOR=ON
>>> -DMETIS_DIR=/usr/local/Cellar/metis/5.1.0
>>> "-Ddune-common_DIR=/Users/afallahi/Documents/codes/dune-common/build-cmake"
>>> "-Ddune-geometry_DIR=/Users/afallahi/Documents/codes/dune-geometry/build-cmake"
>>> "-Ddune-grid_DIR=/Users/afallahi/Documents/codes/dune-grid/build-cmake"
>>> -DCMAKE_CXX_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/g++
>>> -DCMAKE_CXX_FLAGS='-O3'
>>> -DCMAKE_C_COMPILER=/Users/afallahi/Documents/library/gcc-9.2/bin/gcc
>>> -DCMAKE_C_FLAGS='-O3' -DDUNE_GRID_GRIDTYPE_SELECTOR=ON
>>> -DMETIS_DIR=/usr/local/Cellar/metis/5.1.0
>>> "/Users/afallahi/Documents/codes/dune-alugrid"
>>>
>>> -- Dependencies for dune-alugrid: dune-grid (>= 2.8)
>>>
>>> -- Dependencies for dune-grid: dune-geometry (>= 2.8)
>>>
>>> -- Suggestions for dune-grid: dune-uggrid (>=2.8)
>>>
>>> -- Dependencies for dune-geometry: dune-common (>= 2.8)
>>>
>>> -- Could NOT find dune-uggrid (missing: dune-uggrid_DIR)
>>>
>>> -- No full CMake package configuration support available. Falling back
>>> to pkg-config.
>>>
>>> -- Checking for module 'dune-uggrid>=2.8'
>>>
>>> -- No package 'dune-uggrid' found
>>>
>>> -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE)
>>>
>>> -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
>>>
>>> -- Searching for macro file 'DuneCommonMacros' for module 'dune-common'.
>>>
>>> -- Performing tests specific to dune-common from file
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneCommonMacros.cmake.
>>>
>>> -- Set Minimal Debug Level to 4
>>>
>>> -- Could NOT find GMP (missing: GMPXX_LIB GMPXX_INCLUDE_DIR
>>> GMP_INCLUDE_DIR GMP_LIB)
>>>
>>> -- Found MPI_C:
>>> /Users/afallahi/Documents/library/openmpi-4.0/lib/libmpi.dylib (found
>>> suitable version "3.1", minimum required is "3.0")
>>>
>>> -- Found MPI: TRUE (found suitable version "3.1", minimum required is
>>> "3.0") found components: C
>>>
>>> -- Could NOT find TBB (set TBB_DIR to path containing TBBConfig.cmake or
>>> set PKG_CONFIG_PATH to include the location of the tbb.pc file) (missing:
>>> PkgConfigTBB_LINK_LIBRARIES PkgConfigTBB_FOUND) (found version "")
>>>
>>> -- Could NOT find PTScotch (missing: SCOTCH_LIBRARY SCOTCHERR_LIBRARY
>>> SCOTCH_INCLUDE_DIR)
>>>
>>> -- Found MPI_C:
>>> /Users/afallahi/Documents/library/openmpi-4.0/lib/libmpi.dylib (found
>>> version "3.1")
>>>
>>> -- Found MPI: TRUE (found version "3.1") found components: C
>>>
>>> -- Could NOT find ParMETIS (missing: PARMETIS_LIBRARY
>>> PARMETIS_INCLUDE_DIR) (Required is at least version "4.0")
>>>
>>> -- Could NOT find Vc (missing: Vc_DIR)
>>>
>>> -- Setting
>>> dune-common_INCLUDE_DIRS=/Users/afallahi/Documents/codes/dune-common
>>>
>>> -- Setting dune-common_LIBRARIES=dunecommon
>>>
>>> -- Searching for macro file 'DuneUggridMacros' for module 'dune-uggrid'.
>>>
>>> -- No module specific tests performed for module 'dune-uggrid' because
>>> macro file 'DuneUggridMacros.cmake' not found in
>>> /Users/afallahi/Documents/codes/dune-alugrid/cmake/modules;/Users/afallahi/Documents/codes/dune-grid/cmake/modules;/Users/afallahi/Documents/codes/dune-geometry/cmake/modules;/Users/afallahi/Documents/codes/dune-common/cmake/modules.
>>>
>>> -- Searching for macro file 'DuneGeometryMacros' for module
>>> 'dune-geometry'.
>>>
>>> -- No module specific tests performed for module 'dune-geometry' because
>>> macro file 'DuneGeometryMacros.cmake' not found in
>>> /Users/afallahi/Documents/codes/dune-alugrid/cmake/modules;/Users/afallahi/Documents/codes/dune-grid/cmake/modules;/Users/afallahi/Documents/codes/dune-geometry/cmake/modules;/Users/afallahi/Documents/codes/dune-common/cmake/modules.
>>>
>>> -- Setting
>>> dune-geometry_INCLUDE_DIRS=/Users/afallahi/Documents/codes/dune-geometry
>>>
>>> -- Setting dune-geometry_LIBRARIES=dunegeometry
>>>
>>> -- Searching for macro file 'DuneGridMacros' for module 'dune-grid'.
>>>
>>> -- Performing tests specific to dune-grid from file
>>> /Users/afallahi/Documents/codes/dune-grid/cmake/modules/DuneGridMacros.cmake.
>>>
>>> -- Could NOT find ParMETIS (missing: PARMETIS_LIBRARY
>>> PARMETIS_INCLUDE_DIR)
>>>
>>> -- Checking for module 'alberta-grid_1d>=3.0'
>>>
>>> -- No package 'alberta-grid_1d' found
>>>
>>> -- Checking for module 'alberta-grid_2d>=3.0'
>>>
>>> -- No package 'alberta-grid_2d' found
>>>
>>> -- Checking for module 'alberta-grid_3d>=3.0'
>>>
>>> -- No package 'alberta-grid_3d' found
>>>
>>> -- Checking for module 'alberta-grid_4d>=3.0'
>>>
>>> -- No package 'alberta-grid_4d' found
>>>
>>> -- Checking for module 'alberta-grid_5d>=3.0'
>>>
>>> -- No package 'alberta-grid_5d' found
>>>
>>> -- Checking for module 'alberta-grid_6d>=3.0'
>>>
>>> -- No package 'alberta-grid_6d' found
>>>
>>> -- Checking for module 'alberta-grid_7d>=3.0'
>>>
>>> -- No package 'alberta-grid_7d' found
>>>
>>> -- Checking for module 'alberta-grid_8d>=3.0'
>>>
>>> -- No package 'alberta-grid_8d' found
>>>
>>> -- Checking for module 'alberta-grid_9d>=3.0'
>>>
>>> -- No package 'alberta-grid_9d' found
>>>
>>> -- Could NOT find Alberta (set PKG_CONFIG_PATH to include the location
>>> of the alberta-grid_[n]d.pc files) (missing: ALBERTA_GRID_PREFIX) (Required
>>> is at least version "3.0")
>>>
>>> CMake Warning (dev) at
>>> /Applications/CMake.app/Contents/share/cmake-3.20/Modules/FindPackageHandleStandardArgs.cmake:438
>>> (message):
>>>
>>> The package name passed to `find_package_handle_standard_args`
>>> (PkgConfig)
>>>
>>> does not match the name of the calling package (Psurface). This can
>>> lead
>>>
>>> to problems in calling code that expects `find_package` result
>>> variables
>>>
>>> (e.g., `_FOUND`) to follow a certain pattern.
>>>
>>> Call Stack (most recent call first):
>>>
>>> /Applications/CMake.app/Contents/share/cmake-3.20/Modules/FindPkgConfig.cmake:70
>>> (find_package_handle_standard_args)
>>>
>>> /Users/afallahi/Documents/codes/dune-grid/cmake/modules/FindPsurface.cmake:63
>>> (include)
>>>
>>> /Users/afallahi/Documents/codes/dune-grid/cmake/modules/DuneGridMacros.cmake:20
>>> (find_package)
>>>
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:614
>>> (include)
>>>
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:704
>>> (dune_process_dependency_macros)
>>>
>>> CMakeLists.txt:48 (dune_project)
>>>
>>> This warning is for project developers. Use -Wno-dev to suppress it.
>>>
>>>
>>> -- Checking for one of the modules 'psurface'
>>>
>>> -- Checking for module 'psurface'
>>>
>>> -- No package 'psurface' found
>>>
>>> -- Could NOT find Psurface (missing: PSURFACE_INCLUDE_DIR
>>> PSURFACE_LIBRARY)
>>>
>>> -- Could NOT find AmiraMesh (missing: AMIRAMESH_INCLUDE_DIR
>>> AMIRAMESH_LIBRARY)
>>>
>>> -- Setting
>>> dune-grid_INCLUDE_DIRS=/Users/afallahi/Documents/codes/dune-grid
>>>
>>> -- Setting dune-grid_LIBRARIES=dunegrid
>>>
>>> -- Searching for macro file 'DuneAlugridMacros' for module
>>> 'dune-alugrid'.
>>>
>>> -- Performing tests specific to dune-alugrid from file
>>> /Users/afallahi/Documents/codes/dune-alugrid/cmake/modules/DuneAlugridMacros.cmake.
>>>
>>> -- Could NOT find SIONlib (missing: SIONLIB_INCLUDE_DIR SIONLIB_LIBRARY
>>> SIONLIB_HEADER_USABLE SIONLIB_LIB_WORKS SIONLIB_LIB_SIONSER_WORKS)
>>>
>>> -- Could NOT find DLMalloc (missing: DLMALLOC_INCLUDE_DIR
>>> DLMALLOC_SOURCE_INCLUDE)
>>>
>>> -- Could NOT find PTScotch (missing: SCOTCH_LIBRARY SCOTCHERR_LIBRARY
>>> SCOTCH_INCLUDE_DIR)
>>>
>>> Found ZOLTAN_INCLUDE_DIRS-NOTFOUND
>>>
>>> Found ZOLTAN_LIBRARIES-NOTFOUND
>>>
>>> -- Not enabling torture-tests
>>>
>>> -- Using scripts from
>>> /Users/afallahi/Documents/codes/dune-common/cmake/scripts for creating
>>> doxygen stuff.
>>>
>>> CMake Deprecation Warning at
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:168
>>> (message):
>>>
>>> Calling target_link_libraries without the <scope> argument is
>>> deprecated.
>>>
>>> Call Stack (most recent call first):
>>>
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:159
>>> (target_link_libraries_helper)
>>>
>>> lib/CMakeLists.txt:28 (target_link_libraries)
>>>
>>>
>>>
>>> CMake Deprecation Warning at
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:168
>>> (message):
>>>
>>> Calling target_link_libraries without the <scope> argument is
>>> deprecated.
>>>
>>> Call Stack (most recent call first):
>>>
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:159
>>> (target_link_libraries_helper)
>>>
>>> lib/CMakeLists.txt:32 (target_link_libraries)
>>>
>>>
>>>
>>> CMake Deprecation Warning at
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:168
>>> (message):
>>>
>>> Calling target_link_libraries without the <scope> argument is
>>> deprecated.
>>>
>>> Call Stack (most recent call first):
>>>
>>> /Users/afallahi/Documents/codes/dune-common/cmake/modules/DuneMacros.cmake:159
>>> (target_link_libraries_helper)
>>>
>>> lib/CMakeLists.txt:44 (target_link_libraries)
>>>
>>>
>>>
>>> -- Adding custom target for config.h generation
>>>
>>> -- The following OPTIONAL packages have been found:
>>>
>>>
>>> * LATEX
>>>
>>> * LatexMk
>>>
>>> * BLAS, fast linear algebra routines
>>>
>>> * LAPACK, fast linear algebra routines
>>>
>>> * QuadMath, GCC Quad-Precision Math Library, <
>>> https://gcc.gnu.org/onlinedocs/libquadmath>
>>>
>>> * Inkscape, converts SVG images, <www.inkscape.org>
>>>
>>> To generate the documentation with LaTeX
>>>
>>> * Threads, Multi-threading library
>>>
>>> * Python3
>>>
>>> * PkgConfig, Unified interface for querying installed libraries
>>>
>>> To find Dune module dependencies
>>>
>>> * ZLIB
>>>
>>> * METIS, Serial Graph Partitioning
>>>
>>>
>>> -- The following REQUIRED packages have been found:
>>>
>>>
>>> * dune-common
>>>
>>> * dune-grid
>>>
>>> * dune-geometry
>>>
>>>
>>> -- The following OPTIONAL packages have not been found:
>>>
>>>
>>> * dune-uggrid
>>>
>>> * Sphinx, Documentation generator, <www.sphinx-doc.org>
>>>
>>> To generate the documentation from CMake and Python sources
>>>
>>> * Doxygen, Class documentation generator, <www.doxygen.org>
>>>
>>> To generate the class documentation from C++ sources
>>>
>>> * GMP, GNU multi-precision library, <https://gmplib.org>
>>>
>>> * TBB, Intel's Threading Building Blocks
>>>
>>> * Vc, C++ Vectorization library, <https://github.com/VcDevel/Vc>
>>>
>>> For use of SIMD instructions
>>>
>>> * ParMETIS, Parallel Graph Partitioning
>>>
>>> * Alberta (required version >= 3.0), An adaptive hierarchical finite
>>> element toolbox and grid manager
>>>
>>> * Psurface, Piecewise linear bijections between triangulated surfaces
>>>
>>> * AmiraMesh
>>>
>>> * SIONlib
>>>
>>> * DLMalloc
>>>
>>> * PTScotch, Sequential and Parallel Graph Partitioning
>>>
>>> * ZOLTAN
>>>
>>>
>>> -- Configuring done
>>>
>>> CMake Warning (dev) in CMakeLists.txt:
>>>
>>> Policy CMP0087 is not set: Install CODE|SCRIPT allow the use of
>>> generator
>>>
>>> expressions. Run "cmake --help-policy CMP0087" for policy details.
>>> Use
>>>
>>> the cmake_policy command to set the policy and suppress this warning.
>>>
>>> This warning is for project developers. Use -Wno-dev to suppress it.
>>>
>>>
>>> -- Generating done
>>>
>>> -- Build files have been written to:
>>> /Users/afallahi/Documents/codes/dune-alugrid/build-cmake
>>>
>>> --- calling make for dune-alugrid ---
>>>
>>> build directory: build-cmake
>>>
>>> cmake --build . --
>>>
>>> Consolidate compiler generated dependencies of target dunealugrid
>>>
>>> [ 4%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/binaryio.cc.o
>>>
>>> [ 8%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/macrofileheader.cc.o
>>>
>>> [ 12%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/ghost_info.cc.o
>>>
>>> [ 16%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_geo.cc.o
>>>
>>> [ 20%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_hexa_top.cc.o
>>>
>>> [ 24%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_impl.cc.o
>>>
>>> [ 28%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_mgb.cc.o
>>>
>>> [ 32%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_sti.cc.o
>>>
>>> [ 32%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/gitter_tetra_top.cc.o
>>>
>>> [ 36%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/mapp_cube_3d.cc.o
>>>
>>> [ 40%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/mapp_tetra_3d.cc.o
>>>
>>> [ 44%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/myalloc.cc.o
>>>
>>> [ 48%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/duneinterface/gitter_dune_impl.cc.o
>>>
>>> [ 52%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/serial/ghost_elements.cc.o
>>>
>>> [ 56%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/duneinterface/gitter_dune_pll_impl.cc.o
>>>
>>> [ 60%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/mpAccess.cc.o
>>>
>>> [ 64%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_hexa_top_pll.cc.o
>>>
>>> [ 68%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_pll_impl.cc.o
>>>
>>> [ 68%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_pll_idn.cc.o
>>>
>>> [ 72%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_pll_ldb.cc.o
>>>
>>> [ 76%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_pll_mgb.cc.o
>>>
>>> [ 80%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_pll_sti.cc.o
>>>
>>> [ 84%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/impl/parallel/gitter_tetra_top_pll.cc.o
>>>
>>> [ 88%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/3d/faceutility.cc.o
>>>
>>> [ 92%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/3d/mappings.cc.o
>>>
>>> [ 96%] Building CXX object
>>> lib/CMakeFiles/dunealugrid.dir/__/dune/alugrid/3d/topology.cc.o
>>>
>>> [100%] Linking CXX static library libdunealugrid.a
>>>
>>> [100%] Built target dunealugrid
>>>
>>> --- dune-alugrid done ---
>>>
>>> but when I run my code at the point I call loadBalance(), I still get
>>> the following error message:
>>>
>>> **ERROR The use of METIS_PartGraphRecursive is not supported, when the
>>> METIS library is missing! in:
>>> /Users/afallahi/Documents/codes/dune-alugrid/dune/alugrid/impl/parallel/alumetis.hh
>>> line: 137
>>>
>>> **INFO Due to license reasons the library METIS is
>>>
>>> not part of the ALUGrid library distribution.
>>>
>>> To use this feature get a copy of the METIS library
>>>
>>> (see http://www-users.cs.umn.edu/~karypis/metis/metis/ )
>>>
>>> and re-configure the ALUGrid library with the
>>>
>>> --with-metis=PATH_TO_METIS option,
>>>
>>> or choose another Graph partitioning method.
>>>
>>> Exiting program, bye!
>>>
>>> I am stuck since several days in the problem, I will be thankful if you
>>> give me a hint how to resolve the issue.
>>>
>>> Best regards
>>>
>>> _______________________________________________
>>> Dune mailing listDune at lists.dune-project.orghttps://lists.dune-project.org/mailman/listinfo/dune
>>>
>>> --
>>> Dr. Simon Praetorius
>>> Technische Universität Dresden
>>> Institute of Scientific Computing
>>> phone: +49 351 463-34432
>>> mail: simon.praetorius at tu-dresden.de
>>> web: https://tu-dresden.de/mn/math/wir/das-institut/beschaeftigte/simon-praetorius
>>>
>>> _______________________________________________
>>> Dune mailing list
>>> Dune at lists.dune-project.org
>>> https://lists.dune-project.org/mailman/listinfo/dune
>>
>> --
>> Dr. Simon Praetorius
>> Technische Universität Dresden
>> Institute of Scientific Computing
>> phone: +49 351 463-34432
>> mail: simon.praetorius at tu-dresden.de
>> web: https://tu-dresden.de/mn/math/wir/das-institut/beschaeftigte/simon-praetorius
>>
>>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.dune-project.org/pipermail/dune/attachments/20210705/1cbf1f76/attachment.htm>
More information about the Dune
mailing list