[dune-pdelab] Petsc backend

[Markus Blatt]

Hi,

I am having a hard time trying to test the Petsc backend. After fixing
the Petsc test my installation is now found by configure.

Now I get compile errors like below and am wondering what Version of
Petsc and MPI this is tested with. At least with OpenMPI the current
version seems to have problems.

Markus

/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:
In destructor ‘Dune::PDELab::PetscNestedVectorContainer::~PetscNestedVectorContainer()’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:111:9:
error: cannot convert ‘_p_Vec**’ to ‘Vec {aka _p_Vec*}’ for argument
‘1’ to ‘PetscErrorCode VecDestroy(Vec)’
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:
In member function ‘Dune::PDELab::PetscVectorContainer Dune::PDELab::PetscNestedVectorContainer::subVector(Dune::PDELab::PetscNestedVectorContainer::size_type)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:278:9:
error: ‘VecNestGetSubVec’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:
In member function ‘void
Dune::PDELab::PetscNestedVectorContainer::checkin() const’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:294:13:
error: ‘VecNestGetSubVecs’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:
In member function ‘void
Dune::PDELab::PetscNestedVectorContainer::checkout() const’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab/backend/petscnestedvectorbackend.hh:315:13:
error: ‘VecNestGetSubVecs’ was not declared in this scope
In file included from petscsinglephaseflowccfv.cc:42:0:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In constructor
‘Dune::PDELab::PetscMatrixContainer::PetscMatrixContainer(Dune::PDELab::petsc_types::size_type,
Dune::PDELab::petsc_types::size_type, const std::vector<int>&)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:230:9:
error: invalid conversion from ‘Dune::PDELab::petsc_types::size_type
{aka long unsigned int}’ to ‘MPI_Comm {aka ompi_communicator_t*}’
[-fpermissive]
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:230:9:
error: invalid conversion from ‘const int*’ to ‘PetscInt {aka int}’
[-fpermissive]
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:230:9:
error: invalid conversion from ‘_p_Mat**’ to ‘PetscInt {aka int}’
[-fpermissive]
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:230:9:
error: too few arguments to function ‘PetscErrorCode
MatCreateSeqAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, const
PetscInt*, _p_Mat**)’
/usr/lib/petscdir/3.1/include/petscmat.h:226:42: note: declared here
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:232:9:
error: ‘MAT_NO_OFF_PROC_ZERO_ROWS’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In copy constructor
‘Dune::PDELab::PetscMatrixContainer::PetscMatrixContainer(const Dune::PDELab::PetscMatrixContainer&)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:242:9:
error: ‘MAT_NO_OFF_PROC_ZERO_ROWS’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In destructor ‘virtual Dune::PDELab::PetscMatrixContainer::~PetscMatrixContainer()’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:266:11:
error: cannot convert ‘_p_Mat**’ to ‘Mat {aka _p_Mat*}’ for argument
‘1’ to ‘PetscErrorCode MatDestroy(Mat)’
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In member function ‘virtual void Dune::PDELab::PetscMatrixContainer::flush(MatAssemblyType)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:354:17:
error: too many arguments to function ‘PetscErrorCode MatZeroRows(Mat,
PetscInt, const PetscInt*, PetscScalar)’
/usr/lib/petscdir/3.1/include/petscmat.h:557:42: note: declared here
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In constructor
‘Dune::PDELab::PetscNestedMatrixContainer::PetscNestedMatrixContainer(Dune::PDELab::petsc_types::size_type,
Dune::PDELab::petsc_types::size_type, const MatrixArray&)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:523:9:
error: ‘MatCreateNest’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:525:9:
error: ‘MAT_NO_OFF_PROC_ZERO_ROWS’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In constructor
‘Dune::PDELab::PetscNestedMatrixContainer::PetscNestedMatrixContainer(const GO&)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:540:9:
error: ‘MAT_NO_OFF_PROC_ZERO_ROWS’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In member function ‘Dune::PDELab::PetscMatrixContainer
Dune::PDELab::PetscNestedMatrixContainer::subMatrix(Dune::PDELab::petsc_types::size_type, Dune::PDELab::petsc_types::size_type)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:550:9:
error: ‘MatNestGetSubMat’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In member function ‘virtual void Dune::PDELab::PetscNestedMatrixContainer::flush(MatAssemblyType)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:567:13:
error: ‘MatNestGetSubMats’ was not declared in this scope
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:600:27:
error: too many arguments to function ‘PetscErrorCode MatZeroRows(Mat,
PetscInt, const PetscInt*, PetscScalar)’
/usr/lib/petscdir/3.1/include/petscmat.h:557:42: note: declared here
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:
In member function ‘Dune::PDELab::PetscMatrixAccessorBase&
Dune::PDELab::PetscNestedMatrixAccessor<LFSV,
LFSU>::accessor(Dune::PDELab::petsc_types::size_type&, Dune::PDELab::petsc_types::size_type&)’:
/home/mblatt/src/dune/current/dune-pdelab/dune/pdelab//backend/petscmatrixbackend.hh:753:13:
error: there are no arguments to ‘MatNestGetSubMat’ that depend on a
template parameter, so a declaration of ‘MatNestGetSubMat’ must be
available [-fpermissive]


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