[Dune] A problem with Dune compiling
arya fallahi
arya.fallahi at psi.ch
Wed Feb 23 17:01:56 CET 2011
Hi,
Thank you very much for your help.
I saw that today some changed are implemented in dune concerning the mesh refinement. I had a code that used run correctly previously. However, the parts related to refinement are producing the following error messages:
In file included from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement.hh:260,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/virtualrefinement.hh:274,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/io/file/vtk/subsamplingvtkwriter.hh:11,
from ../emp/emp3dfetd/emp3dfetd.hh:41,
from ../emp/emp3dfetd/emp3dfetdnondispersive.hh:48,
from hades3dfetd.cc:106:
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/hcube.cc:411: error: template argument ‘(Dune::GenericGeometry::CubeTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/hcube.cc:411: error: template argument ‘(Dune::GenericGeometry::CubeTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
In file included from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement.hh:261,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/virtualrefinement.hh:274,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/io/file/vtk/subsamplingvtkwriter.hh:11,
from ../emp/emp3dfetd/emp3dfetd.hh:41,
from ../emp/emp3dfetd/emp3dfetdnondispersive.hh:48,
from hades3dfetd.cc:106:
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/simplex.cc:935: error: template argument ‘(Dune::GenericGeometry::SimplexTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/simplex.cc:935: error: template argument ‘(Dune::GenericGeometry::SimplexTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
In file included from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement.hh:262,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/virtualrefinement.hh:274,
from /Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/io/file/vtk/subsamplingvtkwriter.hh:11,
from ../emp/emp3dfetd/emp3dfetd.hh:41,
from ../emp/emp3dfetd/emp3dfetdnondispersive.hh:48,
from hades3dfetd.cc:106:
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/hcubetriangulation.cc:495: error: template argument ‘(Dune::GenericGeometry::CubeTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
/Users/fallahi/svnwork/dune-trunk/dune-grid/dune/grid/common/refinement/hcubetriangulation.cc:495: error: template argument ‘(Dune::GenericGeometry::SimplexTopology<dim>::#‘typename_type’ not supported by pp_cxx_unqualified_id#::id & (~1))’ involves template parameter(s)
Do you think that I need to change my own code or there is something wrong in the new implementation?
Thanks
Arya
On Feb 23, 2011, at 4:11 PM, Christian Engwer wrote:
> Hi,
>
> can you please test the latest dune-common? We believe the problem
> should be fixed now.
>
> Cheers
> Christian
>
> On Wed, Feb 23, 2011 at 03:23:38PM +0100, arya fallahi wrote:
>> Dear Dune team,
>>
>> I just updated my dune version and I have problems with compiling the updated svn version. The dune returned messages and the identities of my working environment are as follows:
>>
>> pcp042851:dune-trunk fallahi$ svn info dune-common
>> Path: dune-common
>> URL: https://svn.dune-project.org/svn/dune-common/trunk
>> Repository Root: https://svn.dune-project.org/svn/dune-common
>> Repository UUID: 419231ca-4411-0410-aba2-fc6cf8c4f609
>> Revision: 6353
>> Node Kind: directory
>> Schedule: normal
>> Last Changed Author: christi
>> Last Changed Rev: 6353
>> Last Changed Date: 2011-02-22 17:27:11 +0100 (Tue, 22 Feb 2011)
>>
>> pcp042851:dune-trunk fallahi$ svn info dune-grid
>> Path: dune-grid
>> URL: https://svn.dune-project.org/svn/dune-grid/trunk
>> Repository Root: https://svn.dune-project.org/svn/dune-grid
>> Repository UUID: f82f27de-4411-0410-b156-930a902cda50
>> Revision: 7451
>> Node Kind: directory
>> Schedule: normal
>> Last Changed Author: mnolte
>> Last Changed Rev: 7451
>> Last Changed Date: 2011-02-23 14:06:08 +0100 (Wed, 23 Feb 2011)
>>
>> pcp042851:dune-trunk fallahi$ svn info dune-istl
>> Path: dune-istl
>> URL: https://svn.dune-project.org/svn/dune-istl/trunk
>> Repository Root: https://svn.dune-project.org/svn/dune-istl
>> Repository UUID: 8c7282f0-4411-0410-8e4f-cdd3e049afb8
>> Revision: 1455
>> Node Kind: directory
>> Schedule: normal
>> Last Changed Author: sander
>> Last Changed Rev: 1453
>> Last Changed Date: 2011-02-14 15:30:19 +0100 (Mon, 14 Feb 2011)
>>
>> pcp042851:dune-trunk fallahi$ time ./dune-common/bin/dunecontrol --opts=arya.imac.opts all
>> --- going to build dune-common dune-grid dune-istl dune-grid-howto hades ---
>> --- calling all for dune-common ---
>> --- calling autogen for dune-common ---
>> Found am directory /Users/fallahi/svnwork/dune-trunk/dune-common/am
>> --> dunedoxynize...
>> Generating doc/doxygen/Doxyfile.in from
>> global style
>> and dune-common config
>> ... done
>> --> libtoolize...
>> glibtoolize: putting auxiliary files in `.'.
>> glibtoolize: linking file `./ltmain.sh'
>> glibtoolize: Remember to add `LT_INIT' to configure.ac.
>> glibtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and
>> glibtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree.
>> glibtoolize: Consider adding `-I m4' to ACLOCAL_AMFLAGS in Makefile.am.
>> --> writing dependencies.m4
>> for dune-common 2.1-svn dune at dune-project.org
>> requires
>> --> aclocal...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune_all.m4:51: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune_common.m4:71: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:18: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> --> autoheader...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:9785: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:9970: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:18: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> --> automake...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:9785: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:9970: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:18: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> configure.ac:13: installing `./config.sub'
>> configure.ac:13: installing `./config.guess'
>> am/documentation:12: doc-local was already defined in condition DUNEWEB, which is included in condition TRUE ...
>> Makefile.am:16: `am/global-rules' included from here
>> am/global-rules:19: `am/documentation' included from here
>> am/top-rules:30: ... `doc-local' previously defined here
>> Makefile.am:15: `am/top-rules' included from here
>> am/documentation:18: doc-clean was already defined in condition DUNEWEB, which is included in condition TRUE ...
>> Makefile.am:16: `am/global-rules' included from here
>> am/global-rules:19: `am/documentation' included from here
>> am/top-rules:31: ... `doc-clean' previously defined here
>> Makefile.am:15: `am/top-rules' included from here
>> am/top-rules:22: user target `distclean-libtool' defined here...
>> Makefile.am:15: `am/top-rules' included from here
>> /usr/bin/../share/automake-1.10/am/libtool.am: ... overrides Automake target `distclean-libtool' defined here
>> --> autoconf...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:9785: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:9970: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:18: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> Now run ./configure to setup dune-common
>> --- calling configure for dune-common ---
>> ----- using default flags $CONFIGURE_FLAGS from /Users/fallahi/svnwork/dune-trunk/arya.imac.opts -----
>> ./configure CXX='mpicxx' CC='mpicc' LD='mpicxx' CXXFLAGS='-DMPICH_IGNORE_CXX_SEEK -O2' CPPFLAGS='-DMPICH_IGNORE_CXX_SEEK -O2' LDFLAGS=' ' --enable-hades3deltd --enable-hades3dfetd --enable-hades3ddges --enable-hades3dfefd --disable-documentation --enable-parallel --enable-debug-output --prefix='/Users/fallahi/ownlib/hades' --with-boost='/Users/fallahi/extlib/boost-trunk' --with-metis='/Users/fallahi/extlib/metis-4.0' --with-rlog='/Users/fallahi/extlib/rlog-trunk' --with-alugrid='/Users/fallahi/extlib/ALUGrid-1.23' ACLOCAL_AMFLAGS="-I . -I m4"
>> checking for a BSD-compatible install... /usr/bin/install -c
>> checking whether build environment is sane... yes
>> checking for a thread-safe mkdir -p... ./install-sh -c -d
>> checking for gawk... no
>> checking for mawk... no
>> checking for nawk... no
>> checking for awk... awk
>> checking whether make sets $(MAKE)... yes
>> checking how to create a pax tar archive... gnutar
>> checking how to create a pax tar archive... (cached) gnutar
>> checking for inkscape... no
>> checking for doxygen... no
>> checking for latex... latex
>> checking for bibtex... bibtex
>> checking for dvipdf... dvipdf
>> checking for dvips... dvips
>> checking for wml... no
>> checking for dot... no
>> checking for perl... perl
>> checking for convert... convert
>> ./configure: line 3638: PKG_PROG_PKG_CONFIG: command not found
>> checking for style of include used by make... GNU
>> checking for gcc... mpicc
>> checking for C compiler default output file name... a.out
>> checking whether the C compiler works... yes
>> checking whether we are cross compiling... no
>> checking for suffix of executables...
>> checking for suffix of object files... o
>> checking whether we are using the GNU C compiler... yes
>> checking whether mpicc accepts -g... yes
>> checking for mpicc option to accept ISO C89... none needed
>> checking dependency style of mpicc... gcc3
>> checking dependency style of mpicc... (cached) gcc3
>> checking how to run the C preprocessor... mpicc -E
>> checking whether we are using the GNU C++ compiler... yes
>> checking whether mpicxx accepts -g... yes
>> checking dependency style of mpicxx... gcc3
>> checking dependency style of mpicxx... (cached) gcc3
>> checking how to run the C++ preprocessor... mpicxx -E
>> checking for g77... no
>> checking for xlf... no
>> checking for f77... no
>> checking for frt... no
>> checking for pgf77... no
>> checking for cf77... no
>> checking for fort77... no
>> checking for fl32... no
>> checking for af77... no
>> checking for xlf90... no
>> checking for f90... no
>> checking for pgf90... no
>> checking for pghpf... no
>> checking for epcf90... no
>> checking for gfortran... gfortran
>> checking whether we are using the GNU Fortran 77 compiler... yes
>> checking whether gfortran accepts -g... yes
>> checking for gfortran... gfortran
>> checking whether we are using the GNU Fortran compiler... yes
>> checking whether gfortran accepts -g... yes
>> checking build system type... i386-apple-darwin10.6.0
>> checking host system type... i386-apple-darwin10.6.0
>> checking for a sed that does not truncate output... /usr/bin/sed
>> checking for grep that handles long lines and -e... /usr/bin/grep
>> checking for egrep... /usr/bin/grep -E
>> checking for fgrep... /usr/bin/grep -F
>> checking for ld used by mpicc... mpicxx
>> checking if the linker (mpicxx) is GNU ld... no
>> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
>> checking the name lister (/usr/bin/nm) interface... BSD nm
>> checking whether ln -s works... yes
>> checking the maximum length of command line arguments... 196608
>> checking whether the shell understands some XSI constructs... yes
>> checking whether the shell understands "+="... yes
>> checking for mpicxx option to reload object files... -r
>> checking how to recognize dependent libraries... pass_all
>> checking for ar... ar
>> checking for strip... strip
>> checking for ranlib... ranlib
>> checking command to parse /usr/bin/nm output from mpicc object... ok
>> checking for dsymutil... dsymutil
>> checking for nmedit... nmedit
>> checking for lipo... lipo
>> checking for otool... otool
>> checking for otool64... no
>> checking for -single_module linker flag... yes
>> checking for -exported_symbols_list linker flag... yes
>> checking for ANSI C header files... yes
>> checking for sys/types.h... yes
>> checking for sys/stat.h... yes
>> checking for stdlib.h... yes
>> checking for string.h... yes
>> checking for memory.h... yes
>> checking for strings.h... yes
>> checking for inttypes.h... yes
>> checking for stdint.h... yes
>> checking for unistd.h... yes
>> checking for dlfcn.h... yes
>> checking whether we are using the GNU C++ compiler... (cached) yes
>> checking whether mpicxx accepts -g... (cached) yes
>> checking dependency style of mpicxx... (cached) gcc3
>> checking dependency style of mpicxx... (cached) gcc3
>> checking how to run the C++ preprocessor... mpicxx -E
>> checking whether we are using the GNU Fortran 77 compiler... (cached) yes
>> checking whether gfortran accepts -g... (cached) yes
>> checking whether we are using the GNU Fortran compiler... (cached) yes
>> checking whether gfortran accepts -g... (cached) yes
>> checking for objdir... .libs
>> checking if mpicc supports -fno-rtti -fno-exceptions... no
>> checking for mpicc option to produce PIC... -fno-common -DPIC
>> checking if mpicc PIC flag -fno-common -DPIC works... yes
>> checking if mpicc static flag -static works... no
>> checking if mpicc supports -c -o file.o... yes
>> checking if mpicc supports -c -o file.o... (cached) yes
>> checking whether the mpicc linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking whether stripping libraries is possible... yes
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for ld used by mpicxx... mpicxx
>> checking if the linker (mpicxx) is GNU ld... no
>> checking whether the mpicxx linker (mpicxx) supports shared libraries... yes
>> checking for mpicxx option to produce PIC... -fno-common -DPIC
>> checking if mpicxx PIC flag -fno-common -DPIC works... yes
>> checking if mpicxx static flag -static works... no
>> checking if mpicxx supports -c -o file.o... yes
>> checking if mpicxx supports -c -o file.o... (cached) yes
>> checking whether the mpicxx linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for gfortran option to produce PIC... -fno-common
>> checking if gfortran PIC flag -fno-common works... yes
>> checking if gfortran static flag -static works... no
>> checking if gfortran supports -c -o file.o... yes
>> checking if gfortran supports -c -o file.o... (cached) yes
>> checking whether the gfortran linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for gfortran option to produce PIC... -fno-common
>> checking if gfortran PIC flag -fno-common works... yes
>> checking if gfortran static flag -static works... no
>> checking if gfortran supports -c -o file.o... yes
>> checking if gfortran supports -c -o file.o... (cached) yes
>> checking whether the gfortran linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> ./configure: line 22928: PKG_PROG_PKG_CONFIG: command not found
>> checking for ranlib... (cached) ranlib
>> checking how to get verbose linking output from gfortran... -v
>> checking for Fortran 77 libraries of gfortran... -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lgfortranbegin -lgfortran
>> checking for dummy main to link with Fortran 77 libraries... none
>> checking for Fortran 77 name-mangling scheme... unknown
>> checking for unknown... no
>> checking for ATL_xerbla in -latlas... no
>> checking for unknown in -lblas... no
>> checking for unknown in -lcxml... no
>> checking for unknown in -ldxml... no
>> checking for unknown in -lscs... no
>> checking for unknown in -lcomplib.sgimath... no
>> checking for unknown in -lblas... (cached) no
>> checking for unknown in -lblas... (cached) no
>> checking how to get verbose linking output from gfortran... -v
>> checking for Fortran libraries of gfortran... -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lgfortranbegin -lgfortran
>> checking for dummy main to link with Fortran libraries... none
>> checking for Fortran name-mangling scheme... unknown
>> configure: WARNING: unknown Fortran name-mangling scheme
>> checking whether compiler is officially supported by DUNE... yes
>> checking whether g++ accepts -std=c++0x... no
>> checking whether static_assert is supported... no
>> checking whether nullptr is supported... no
>> checking type_traits usability... no
>> checking type_traits presence... no
>> checking for type_traits... no
>> checking tr1/type_traits usability... yes
>> checking tr1/type_traits presence... yes
>> checking for tr1/type_traits... yes
>> checking tuple usability... no
>> checking tuple presence... no
>> checking for tuple... no
>> checking tr1/tuple usability... yes
>> checking tr1/tuple presence... yes
>> checking for tr1/tuple... yes
>> checking memory usability... yes
>> checking memory presence... yes
>> checking for memory... yes
>> checking tr1/memory usability... yes
>> checking tr1/memory presence... yes
>> checking for tr1/memory... yes
>> checking boost/shared_ptr.hpp usability... no
>> checking boost/shared_ptr.hpp presence... no
>> checking for boost/shared_ptr.hpp... no
>> checking the location of shared_ptr header file...
>> checking boost/make_shared.hpp usability... no
>> checking boost/make_shared.hpp presence... no
>> checking for boost/make_shared.hpp... no
>> checking whether compiling C++ code works... yes
>> checking whether linking C++ objects works... yes
>> checking for __attribute__((deprecated))... yes
>> checking rpc/rpc.h usability... yes
>> checking rpc/rpc.h presence... yes
>> checking for rpc/rpc.h... yes
>> checking for mpicc... mpicc
>> checking for MPI_Init... yes
>> checking for mpi.h... yes
>> configure: Trying to identify the version of MPI compiler mpicc
>> checking for lam... rm: conftest.dSYM: is a directory
>> no
>> checking for mpich... rm: conftest.dSYM: is a directory
>> no
>> checking for OpenMPI... yes
>> rm: conftest.dSYM: is a directory
>> checking whether compiling with OpenMPI works... yes
>> configure: WARNING: Disabled test whether running with OpenMPI works.
>> checking for MPI_Finalized in -lm... yes
>> checking for an ANSI C-conforming const... yes
>> checking for inline... inline
>> checking for size_t... yes
>> checking whether struct tm is in sys/time.h or time.h... time.h
>> checking for stdlib.h... (cached) yes
>> checking for GNU libc compatible malloc... yes
>> checking malloc.h usability... no
>> checking malloc.h presence... no
>> checking for malloc.h... no
>> checking for string.h... (cached) yes
>> checking for pow in -lm... yes
>> checking for sqrt... yes
>> checking for strchr... yes
>> configure: creating ./config.status
>> config.status: creating Makefile
>> config.status: creating lib/Makefile
>> config.status: creating bin/Makefile
>> config.status: creating dune/Makefile
>> config.status: creating dune/common/Makefile
>> config.status: creating dune/common/test/Makefile
>> config.status: creating dune/common/exprtmpl/Makefile
>> config.status: creating dune/common/parallel/Makefile
>> config.status: creating dune/common/parallel/test/Makefile
>> config.status: creating doc/Makefile
>> config.status: creating doc/doxygen/Makefile
>> config.status: creating doc/doxygen/Doxyfile
>> config.status: creating doc/buildsystem/Makefile
>> config.status: creating m4/Makefile
>> config.status: creating am/Makefile
>> config.status: creating bin/check-log-store
>> config.status: creating dune-common.pc
>> config.status: creating config.h
>> config.status: config.h is unchanged
>> config.status: executing depfiles commands
>> config.status: executing libtool commands
>>
>> Found the following Dune-components:
>>
>> ----------------------------------------
>>
>> MPI.....................: yes (OpenMPI)
>>
>> ----------------------------------------
>>
>> See ./configure --help and config.log for reasons why a component wasn't found
>>
>> --- calling make for dune-common ---
>> make
>> cd . && /bin/sh /Users/fallahi/svnwork/dune-trunk/dune-common/missing --run autoheader
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:9785: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:9970: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:18: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> rm -f stamp-h1
>> touch config.h.in
>> make all-recursive
>> Making all in dune
>> Making all in common
>> Making all in .
>> make[4]: Nothing to be done for `all-am'.
>> Making all in test
>> make[4]: Nothing to be done for `all'.
>> Making all in exprtmpl
>> make[4]: Nothing to be done for `all'.
>> Making all in parallel
>> Making all in test
>> make[5]: Nothing to be done for `all'.
>> make[5]: Nothing to be done for `all-am'.
>> make[3]: Nothing to be done for `all-am'.
>> Making all in lib
>> make[2]: Nothing to be done for `all'.
>> Making all in doc
>> Making all in doxygen
>> make[3]: Nothing to be done for `all'.
>> Making all in buildsystem
>> make[3]: Nothing to be done for `all'.
>> make[3]: Nothing to be done for `all-am'.
>> Making all in bin
>> make[2]: Nothing to be done for `all'.
>> Making all in m4
>> make[2]: Nothing to be done for `all'.
>> Making all in am
>> cd . && /bin/sh ./config.status config.h
>> config.status: creating config.h
>> config.status: config.h is unchanged
>> --- dune-common done ---
>> --- calling all for dune-grid ---
>> --- calling autogen for dune-grid ---
>> Found am directory /Users/fallahi/svnwork/dune-trunk/dune-common/am
>> --> dunedoxynize...
>> Generating doc/doxygen/Doxyfile.in from
>> global style
>> and dune-grid config
>> ... done
>> --> libtoolize...
>> glibtoolize: putting auxiliary files in `.'.
>> glibtoolize: linking file `./ltmain.sh'
>> glibtoolize: Remember to add `LT_INIT' to configure.ac.
>> glibtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and
>> glibtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree.
>> glibtoolize: Consider adding `-I m4' to ACLOCAL_AMFLAGS in Makefile.am.
>> --> writing dependencies.m4
>> for dune-grid 2.1-svn dune at dune-project.org
>> requires dune-common >= 2.1
>> --> aclocal...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune_all.m4:51: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune_common.m4:71: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:26: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune.m4:489: DUNE_CHECK_MODULES is expanded from...
>> /Users/fallahi/svnwork/dune-trunk/dune-common/m4/dune_common.m4:80: DUNE_COMMON_CHECK_MODULE is expanded from...
>> --> linking dune-common/am...
>> --> autoheader...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:11456: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:11691: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:26: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> aclocal.m4:11367: DUNE_CHECK_MODULES is expanded from...
>> aclocal.m4:11700: DUNE_COMMON_CHECK_MODULE is expanded from...
>> --> automake...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:11456: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:11691: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:26: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> aclocal.m4:11367: DUNE_CHECK_MODULES is expanded from...
>> aclocal.m4:11700: DUNE_COMMON_CHECK_MODULE is expanded from...
>> configure.ac:13: installing `./config.sub'
>> configure.ac:13: installing `./config.guess'
>> am/top-rules:30: doc-local was already defined in condition TRUE, which includes condition DUNEWEB ...
>> Makefile.am:30: `am/top-rules' included from here
>> am/documentation:12: ... `doc-local' previously defined here
>> Makefile.am:29: `am/global-rules' included from here
>> am/global-rules:19: `am/documentation' included from here
>> am/top-rules:31: doc-clean was already defined in condition TRUE, which includes condition DUNEWEB ...
>> Makefile.am:30: `am/top-rules' included from here
>> am/documentation:18: ... `doc-clean' previously defined here
>> Makefile.am:29: `am/global-rules' included from here
>> am/global-rules:19: `am/documentation' included from here
>> am/top-rules:22: user target `distclean-libtool' defined here...
>> Makefile.am:30: `am/top-rules' included from here
>> /usr/bin/../share/automake-1.10/am/libtool.am: ... overrides Automake target `distclean-libtool' defined here
>> --> autoconf...
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:11456: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:11691: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:26: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> aclocal.m4:11367: DUNE_CHECK_MODULES is expanded from...
>> aclocal.m4:11700: DUNE_COMMON_CHECK_MODULE is expanded from...
>> Now run ./configure to setup dune-grid
>> --- calling configure for dune-grid ---
>> ----- using default flags $CONFIGURE_FLAGS from /Users/fallahi/svnwork/dune-trunk/arya.imac.opts -----
>> ./configure CXX='mpicxx' CC='mpicc' LD='mpicxx' CXXFLAGS='-DMPICH_IGNORE_CXX_SEEK -O2' CPPFLAGS='-DMPICH_IGNORE_CXX_SEEK -O2' LDFLAGS=' ' --enable-hades3deltd --enable-hades3dfetd --enable-hades3ddges --enable-hades3dfefd --disable-documentation --enable-parallel --enable-debug-output --prefix='/Users/fallahi/ownlib/hades' --with-boost='/Users/fallahi/extlib/boost-trunk' --with-metis='/Users/fallahi/extlib/metis-4.0' --with-rlog='/Users/fallahi/extlib/rlog-trunk' --with-alugrid='/Users/fallahi/extlib/ALUGrid-1.23' "--with-dune-common=/Users/fallahi/svnwork/dune-trunk/dune-common/" ACLOCAL_AMFLAGS="-I . -I m4 -I /Users/fallahi/svnwork/dune-trunk/dune-common/m4"
>> checking for a BSD-compatible install... /usr/bin/install -c
>> checking whether build environment is sane... yes
>> checking for a thread-safe mkdir -p... ./install-sh -c -d
>> checking for gawk... no
>> checking for mawk... no
>> checking for nawk... no
>> checking for awk... awk
>> checking whether make sets $(MAKE)... yes
>> checking how to create a pax tar archive... gnutar
>> checking how to create a pax tar archive... (cached) gnutar
>> checking for inkscape... no
>> checking for doxygen... no
>> checking for latex... latex
>> checking for bibtex... bibtex
>> checking for dvipdf... dvipdf
>> checking for dvips... dvips
>> checking for wml... no
>> checking for dot... no
>> checking for perl... perl
>> checking for convert... convert
>> ./configure: line 3785: PKG_PROG_PKG_CONFIG: command not found
>> checking for style of include used by make... GNU
>> checking for gcc... mpicc
>> checking for C compiler default output file name... a.out
>> checking whether the C compiler works... yes
>> checking whether we are cross compiling... no
>> checking for suffix of executables...
>> checking for suffix of object files... o
>> checking whether we are using the GNU C compiler... yes
>> checking whether mpicc accepts -g... yes
>> checking for mpicc option to accept ISO C89... none needed
>> checking dependency style of mpicc... gcc3
>> checking dependency style of mpicc... (cached) gcc3
>> checking how to run the C preprocessor... mpicc -E
>> checking whether we are using the GNU C++ compiler... yes
>> checking whether mpicxx accepts -g... yes
>> checking dependency style of mpicxx... gcc3
>> checking dependency style of mpicxx... (cached) gcc3
>> checking how to run the C++ preprocessor... mpicxx -E
>> checking for g77... no
>> checking for xlf... no
>> checking for f77... no
>> checking for frt... no
>> checking for pgf77... no
>> checking for cf77... no
>> checking for fort77... no
>> checking for fl32... no
>> checking for af77... no
>> checking for xlf90... no
>> checking for f90... no
>> checking for pgf90... no
>> checking for pghpf... no
>> checking for epcf90... no
>> checking for gfortran... gfortran
>> checking whether we are using the GNU Fortran 77 compiler... yes
>> checking whether gfortran accepts -g... yes
>> checking for gfortran... gfortran
>> checking whether we are using the GNU Fortran compiler... yes
>> checking whether gfortran accepts -g... yes
>> checking build system type... i386-apple-darwin10.6.0
>> checking host system type... i386-apple-darwin10.6.0
>> checking for a sed that does not truncate output... /usr/bin/sed
>> checking for grep that handles long lines and -e... /usr/bin/grep
>> checking for egrep... /usr/bin/grep -E
>> checking for fgrep... /usr/bin/grep -F
>> checking for ld used by mpicc... mpicxx
>> checking if the linker (mpicxx) is GNU ld... no
>> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
>> checking the name lister (/usr/bin/nm) interface... BSD nm
>> checking whether ln -s works... yes
>> checking the maximum length of command line arguments... 196608
>> checking whether the shell understands some XSI constructs... yes
>> checking whether the shell understands "+="... yes
>> checking for mpicxx option to reload object files... -r
>> checking how to recognize dependent libraries... pass_all
>> checking for ar... ar
>> checking for strip... strip
>> checking for ranlib... ranlib
>> checking command to parse /usr/bin/nm output from mpicc object... ok
>> checking for dsymutil... dsymutil
>> checking for nmedit... nmedit
>> checking for lipo... lipo
>> checking for otool... otool
>> checking for otool64... no
>> checking for -single_module linker flag... yes
>> checking for -exported_symbols_list linker flag... yes
>> checking for ANSI C header files... yes
>> checking for sys/types.h... yes
>> checking for sys/stat.h... yes
>> checking for stdlib.h... yes
>> checking for string.h... yes
>> checking for memory.h... yes
>> checking for strings.h... yes
>> checking for inttypes.h... yes
>> checking for stdint.h... yes
>> checking for unistd.h... yes
>> checking for dlfcn.h... yes
>> checking whether we are using the GNU C++ compiler... (cached) yes
>> checking whether mpicxx accepts -g... (cached) yes
>> checking dependency style of mpicxx... (cached) gcc3
>> checking dependency style of mpicxx... (cached) gcc3
>> checking how to run the C++ preprocessor... mpicxx -E
>> checking whether we are using the GNU Fortran 77 compiler... (cached) yes
>> checking whether gfortran accepts -g... (cached) yes
>> checking whether we are using the GNU Fortran compiler... (cached) yes
>> checking whether gfortran accepts -g... (cached) yes
>> checking for objdir... .libs
>> checking if mpicc supports -fno-rtti -fno-exceptions... no
>> checking for mpicc option to produce PIC... -fno-common -DPIC
>> checking if mpicc PIC flag -fno-common -DPIC works... yes
>> checking if mpicc static flag -static works... no
>> checking if mpicc supports -c -o file.o... yes
>> checking if mpicc supports -c -o file.o... (cached) yes
>> checking whether the mpicc linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking whether stripping libraries is possible... yes
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for ld used by mpicxx... mpicxx
>> checking if the linker (mpicxx) is GNU ld... no
>> checking whether the mpicxx linker (mpicxx) supports shared libraries... yes
>> checking for mpicxx option to produce PIC... -fno-common -DPIC
>> checking if mpicxx PIC flag -fno-common -DPIC works... yes
>> checking if mpicxx static flag -static works... no
>> checking if mpicxx supports -c -o file.o... yes
>> checking if mpicxx supports -c -o file.o... (cached) yes
>> checking whether the mpicxx linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for gfortran option to produce PIC... -fno-common
>> checking if gfortran PIC flag -fno-common works... yes
>> checking if gfortran static flag -static works... no
>> checking if gfortran supports -c -o file.o... yes
>> checking if gfortran supports -c -o file.o... (cached) yes
>> checking whether the gfortran linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> checking if libtool supports shared libraries... yes
>> checking whether to build shared libraries... no
>> checking whether to build static libraries... yes
>> checking for gfortran option to produce PIC... -fno-common
>> checking if gfortran PIC flag -fno-common works... yes
>> checking if gfortran static flag -static works... no
>> checking if gfortran supports -c -o file.o... yes
>> checking if gfortran supports -c -o file.o... (cached) yes
>> checking whether the gfortran linker (mpicxx) supports shared libraries... yes
>> checking dynamic linker characteristics... darwin10.6.0 dyld
>> checking how to hardcode library paths into programs... immediate
>> ./configure: line 23075: PKG_PROG_PKG_CONFIG: command not found
>> checking for ranlib... (cached) ranlib
>> checking how to get verbose linking output from gfortran... -v
>> checking for Fortran 77 libraries of gfortran... -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lgfortranbegin -lgfortran
>> checking for dummy main to link with Fortran 77 libraries... none
>> checking for Fortran 77 name-mangling scheme... unknown
>> checking for unknown... no
>> checking for ATL_xerbla in -latlas... no
>> checking for unknown in -lblas... no
>> checking for unknown in -lcxml... no
>> checking for unknown in -ldxml... no
>> checking for unknown in -lscs... no
>> checking for unknown in -lcomplib.sgimath... no
>> checking for unknown in -lblas... (cached) no
>> checking for unknown in -lblas... (cached) no
>> checking how to get verbose linking output from gfortran... -v
>> checking for Fortran libraries of gfortran... -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lgfortranbegin -lgfortran
>> checking for dummy main to link with Fortran libraries... none
>> checking for Fortran name-mangling scheme... unknown
>> configure: WARNING: unknown Fortran name-mangling scheme
>> checking whether compiler is officially supported by DUNE... yes
>> checking whether g++ accepts -std=c++0x... no
>> checking whether static_assert is supported... no
>> checking whether nullptr is supported... no
>> checking type_traits usability... no
>> checking type_traits presence... no
>> checking for type_traits... no
>> checking tr1/type_traits usability... yes
>> checking tr1/type_traits presence... yes
>> checking for tr1/type_traits... yes
>> checking tuple usability... no
>> checking tuple presence... no
>> checking for tuple... no
>> checking tr1/tuple usability... yes
>> checking tr1/tuple presence... yes
>> checking for tr1/tuple... yes
>> checking memory usability... yes
>> checking memory presence... yes
>> checking for memory... yes
>> checking tr1/memory usability... yes
>> checking tr1/memory presence... yes
>> checking for tr1/memory... yes
>> checking boost/shared_ptr.hpp usability... no
>> checking boost/shared_ptr.hpp presence... no
>> checking for boost/shared_ptr.hpp... no
>> checking the location of shared_ptr header file...
>> checking boost/make_shared.hpp usability... no
>> checking boost/make_shared.hpp presence... no
>> checking for boost/make_shared.hpp... no
>> checking whether compiling C++ code works... yes
>> checking whether linking C++ objects works... yes
>> checking for __attribute__((deprecated))... yes
>> checking rpc/rpc.h usability... yes
>> checking rpc/rpc.h presence... yes
>> checking for rpc/rpc.h... yes
>> checking for mpicc... mpicc
>> checking for MPI_Init... yes
>> checking for mpi.h... yes
>> configure: Trying to identify the version of MPI compiler mpicc
>> checking for lam... rm: conftest.dSYM: is a directory
>> no
>> checking for mpich... rm: conftest.dSYM: is a directory
>> no
>> checking for OpenMPI... yes
>> rm: conftest.dSYM: is a directory
>> checking whether compiling with OpenMPI works... yes
>> configure: WARNING: Disabled test whether running with OpenMPI works.
>> checking for MPI_Finalized in -lm... yes
>> checking for an ANSI C-conforming const... yes
>> checking for inline... inline
>> checking for size_t... yes
>> checking whether struct tm is in sys/time.h or time.h... time.h
>> checking for stdlib.h... (cached) yes
>> checking for GNU libc compatible malloc... yes
>> checking malloc.h usability... no
>> checking malloc.h presence... no
>> checking for malloc.h... no
>> checking for string.h... (cached) yes
>> checking for pow in -lm... yes
>> checking for sqrt... yes
>> checking for strchr... yes
>> ./configure: line 30216: PKG_PROG_PKG_CONFIG: command not found
>> configure: creating ./config.lt
>> config.lt: creating libtool
>> checking for dune-common installation or source tree... found in /Users/fallahi/svnwork/dune-trunk/dune-common
>> checking dune/common/stdstreams.hh usability... yes
>> checking dune/common/stdstreams.hh presence... yes
>> checking for dune/common/stdstreams.hh... yes
>> checking for libdunecommon... yes
>> checking for X... libraries /usr/X11/lib, headers
>> checking whether -R must be followed by a space... no
>> checking for gethostbyname... yes
>> checking for connect... yes
>> checking for remove... yes
>> checking for shmat... yes
>> checking for IceConnectionNumber in -lICE... yes
>> checking for the pthreads library -lpthreads... no
>> checking whether pthreads work without any flags... yes
>> checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
>> checking if more special flags are required for pthreads... -D_THREAD_SAFE
>> checking for cc_r... mpicc
>> checking whether we are using the Microsoft C compiler... no
>> checking windows.h usability... no
>> checking windows.h presence... no
>> checking for windows.h... no
>> checking for OpenGL library... no
>> checking grape.h usability... no
>> checking grape.h presence... no
>> checking for grape.h... no
>> configure: searching for ALBERTA in /usr...
>> configure: searching for ALBERTA in /usr/local...
>> configure: searching for ALBERTA in /usr/local/alberta...
>> configure: searching for ALBERTA in /opt/alberta...
>> checking alberta.h usability... no
>> checking alberta.h presence... no
>> checking for alberta.h... no
>> configure: WARNING: alberta.h not found in -I/include/alberta
>> ./configure: line 36577: --libs-only-L: command not found
>> ./configure: line 36578: --libs-only-L: command not found
>> checking for UG... ./configure: line 36585: --exists: command not found
>> no
>> configure: WARNING: UG not found
>> checking for amiramesh/AmiraMesh.h... no
>> configure: WARNING: AmiraMesh.h not found in /usr/local/amiramesh/include/amiramesh
>> checking psurface/PSurface.h usability... no
>> checking psurface/PSurface.h presence... no
>> checking for psurface/PSurface.h... no
>> checking ALUGrid version >= 1.23... ./configure: line 37436: --atleast-version=1.23: command not found
>> yes (ALUGrid-1.23)
>> checking alugrid_serial.h usability... yes
>> checking alugrid_serial.h presence... yes
>> checking for alugrid_serial.h... yes
>> checking alugrid_parallel.h usability... yes
>> checking alugrid_parallel.h presence... yes
>> checking for alugrid_parallel.h... yes
>> checking for malloc in -lalugrid... yes
>> configure: searching for GMP in /usr...
>> checking gmpxx.h usability... no
>> checking gmpxx.h presence... no
>> checking for gmpxx.h... no
>> configure: WARNING: gmpxx.h not found in /usr
>> configure: searching for GMP in /usr/local...
>> checking for gmpxx.h... (cached) no
>> configure: WARNING: gmpxx.h not found in /usr/local
>> checking for alglib4dune (>=1.0) via pkgconfig... ./configure: line 38736: pkg-config: command not found
>> no
>>
>> Found the following Dune-components:
>>
>> ----------------------------------------
>>
>> dune-common.............: version 2.1-svn
>> ALBERTA.................: no
>> ALUGrid.................: version 1.23 (parallel)
>> AlgLib for DUNE.........: no
>> AmiraMesh...............: no
>> Extra utils enabled.....: no
>> GMP.....................: no
>> Grape...................: no
>> MPI.....................: yes (OpenMPI)
>> OpenGL..................: no
>> UG......................: no
>> psurface................: no
>>
>> ----------------------------------------
>>
>> See ./configure --help and config.log for reasons why a component wasn't found
>>
>> configure: creating ./config.status
>> config.status: creating Makefile
>> config.status: creating lib/Makefile
>> config.status: creating doc/appl/refelements/Makefile
>> config.status: creating doc/appl/Makefile
>> config.status: creating doc/refinement/Makefile
>> config.status: creating doc/doxygen/Makefile
>> config.status: creating doc/doxygen/Doxyfile
>> config.status: creating doc/grids/Makefile
>> config.status: creating doc/grids/amc/Makefile
>> config.status: creating doc/grids/amiramesh/Makefile
>> config.status: creating doc/grids/dgf/Makefile
>> config.status: creating doc/grids/gridfactory/Makefile
>> config.status: creating doc/grids/gmsh/Makefile
>> config.status: creating doc/grids/starcd/Makefile
>> config.status: creating doc/Makefile
>> config.status: creating dune/Makefile
>> config.status: creating dune/grid/Makefile
>> config.status: creating dune/grid/test/Makefile
>> config.status: creating dune/grid/common/test/Makefile
>> config.status: creating dune/grid/common/quadraturerules/Makefile
>> config.status: creating dune/grid/common/refinement/Makefile
>> config.status: creating dune/grid/common/Makefile
>> config.status: creating dune/grid/uggrid/Makefile
>> config.status: creating dune/grid/sgrid/Makefile
>> config.status: creating dune/grid/albertagrid/Makefile
>> config.status: creating dune/grid/albertagrid/test/Makefile
>> config.status: creating dune/grid/yaspgrid/Makefile
>> config.status: creating dune/grid/onedgrid/Makefile
>> config.status: creating dune/grid/utility/Makefile
>> config.status: creating dune/grid/utility/test/Makefile
>> config.status: creating dune/grid/alugrid/common/Makefile
>> config.status: creating dune/grid/alugrid/2d/Makefile
>> config.status: creating dune/grid/alugrid/3d/Makefile
>> config.status: creating dune/grid/alugrid/Makefile
>> config.status: creating dune/grid/io/file/test/Makefile
>> config.status: creating dune/grid/io/file/amiramesh/Makefile
>> config.status: creating dune/grid/io/file/dgfparser/Makefile
>> config.status: creating dune/grid/io/file/dgfparser/test/Makefile
>> config.status: creating dune/grid/io/file/dgfparser/utils/Makefile
>> config.status: creating dune/grid/io/file/gnuplot/Makefile
>> config.status: creating dune/grid/io/file/vtk/Makefile
>> config.status: creating dune/grid/io/file/Makefile
>> config.status: creating dune/grid/io/visual/grape/Makefile
>> config.status: creating dune/grid/io/visual/Makefile
>> config.status: creating dune/grid/io/Makefile
>> config.status: creating dune/grid/genericgeometry/Makefile
>> config.status: creating dune/grid/genericgeometry/test/Makefile
>> config.status: creating dune/grid/geometrygrid/Makefile
>> config.status: creating m4/Makefile
>> config.status: creating dune-grid.pc
>> config.status: creating utility/Makefile
>> config.status: creating utility/alu-to-vtk/Makefile
>> config.status: creating utility/gmsh-to-alu/Makefile
>> config.status: creating utility/gridinfo-gmsh/Makefile
>> config.status: creating config.h
>> config.status: config.h is unchanged
>> config.status: executing depfiles commands
>> config.status: executing libtool commands
>> --- calling make for dune-grid ---
>> make
>> cd . && /bin/sh /Users/fallahi/svnwork/dune-trunk/dune-grid/missing --run autoheader
>> configure.ac:13: warning: PKG_PROG_PKG_CONFIG is m4_require'd but not m4_defun'd
>> aclocal.m4:11456: DUNE_CHECK_ALL is expanded from...
>> configure.ac:13: the top level
>> aclocal.m4:11691: DUNE_COMMON_CHECKS is expanded from...
>> dependencies.m4:26: DUNE_CHECK_MOD_DEPENDENCIES is expanded from...
>> aclocal.m4:11367: DUNE_CHECK_MODULES is expanded from...
>> aclocal.m4:11700: DUNE_COMMON_CHECK_MODULE is expanded from...
>> rm -f stamp-h1
>> touch config.h.in
>> cd . && /bin/sh ./config.status config.h
>> config.status: creating config.h
>> config.status: config.h is unchanged
>> make all-recursive
>> Making all in doc
>> Making all in appl
>> Making all in refelements
>> make[4]: Nothing to be done for `all'.
>> make[4]: Nothing to be done for `all-am'.
>> Making all in doxygen
>> make[3]: Nothing to be done for `all'.
>> Making all in grids
>> Making all in amc
>> make[4]: Nothing to be done for `all'.
>> Making all in amiramesh
>> make[4]: Nothing to be done for `all'.
>> Making all in gridfactory
>> make[4]: Nothing to be done for `all'.
>> Making all in gmsh
>> make[4]: Nothing to be done for `all'.
>> Making all in starcd
>> make[4]: Nothing to be done for `all'.
>> Making all in dgf
>> make[4]: Nothing to be done for `all'.
>> make[4]: Nothing to be done for `all-am'.
>> make[3]: Nothing to be done for `all-am'.
>> Making all in dune
>> Making all in grid
>> Making all in genericgeometry
>> Making all in test
>> make[5]: Nothing to be done for `all'.
>> make[5]: Nothing to be done for `all-am'.
>> Making all in common
>> Making all in refinement
>> make[5]: Nothing to be done for `all'.
>> Making all in test
>> make[5]: Nothing to be done for `all'.
>> Making all in quadraturerules
>> make[5]: Nothing to be done for `all'.
>> make[5]: Nothing to be done for `all-am'.
>> Making all in alugrid
>> Making all in common
>> make[5]: Nothing to be done for `all'.
>> Making all in 2d
>> /bin/sh ../../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../../.. -I/Users/fallahi/svnwork/dune-trunk/dune-common -I../../../.. -D_REENTRANT -I/Users/fallahi/extlib/openmpi-1.4.1/include -DMPIPP_H -DENABLE_MPI=1 -I/Users/fallahi/extlib/ALUGrid-1.23/include -I/Users/fallahi/extlib/ALUGrid-1.23/include/serial -I/Users/fallahi/extlib/ALUGrid-1.23/include/duneinterface -DENABLE_ALUGRID -I/Users/fallahi/extlib/ALUGrid-1.23/include/parallel -DMPICH_IGNORE_CXX_SEEK -O2 -DMPICH_IGNORE_CXX_SEEK -O2 -MT libalu2d_la-intersection.lo -MD -MP -MF .deps/libalu2d_la-intersection.Tpo -c -o libalu2d_la-intersection.lo `test -f 'intersection.cc' || echo './'`intersection.cc
>> libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../../.. -I/Users/fallahi/svnwork/dune-trunk/dune-common -I../../../.. -D_REENTRANT -I/Users/fallahi/extlib/openmpi-1.4.1/include -DMPIPP_H -DENABLE_MPI=1 -I/Users/fallahi/extlib/ALUGrid-1.23/include -I/Users/fallahi/extlib/ALUGrid-1.23/include/serial -I/Users/fallahi/extlib/ALUGrid-1.23/include/duneinterface -DENABLE_ALUGRID -I/Users/fallahi/extlib/ALUGrid-1.23/include/parallel -DMPICH_IGNORE_CXX_SEEK -O2 -DMPICH_IGNORE_CXX_SEEK -O2 -MT libalu2d_la-intersection.lo -MD -MP -MF .deps/libalu2d_la-intersection.Tpo -c intersection.cc -o libalu2d_la-intersection.o
>> In file included from /Users/fallahi/svnwork/dune-trunk/dune-common/dune/common/mpicollectivecommunication.hh:19,
>> from ../../../../dune/grid/alugrid/3d/alu3dinclude.hh:26,
>> from ../../../../dune/grid/alugrid/3d/mappings.hh:14,
>> from ../../../../dune/grid/alugrid/2d/geometry.hh:10,
>> from intersection.cc:8:
>> /Users/fallahi/svnwork/dune-trunk/dune-common/dune/common/shared_ptr.hh:307: error: ‘std::tr1::make_shared’ has not been declared
>> make[5]: *** [libalu2d_la-intersection.lo] Error 1
>> make[4]: *** [all-recursive] Error 1
>> make[3]: *** [all-recursive] Error 1
>> make[2]: *** [all-recursive] Error 1
>> make[1]: *** [all-recursive] Error 1
>> make: *** [all] Error 2
>> --- Failed to build dune-grid ---
>> Terminating dunecontrol due to previous errors!
>>
>> real 1m3.644s
>> user 0m40.626s
>> sys 0m23.319s
>>
>> Thank you very much for your help.
>>
>> Arya Fallahi,
>> Dr. sc. techn. ETH,
>> Computational Accelerator Scientist
>> Paul Scherrer Institute (PSI),
>> CH-5232 Villigen, Switzerland,
>> arya.fallahi at psi.ch,
>> +41(0)56 310 50 17
>>
>>
>>
>> _______________________________________________
>> Dune mailing list
>> Dune at dune-project.org
>> http://lists.dune-project.org/mailman/listinfo/dune
>>
More information about the Dune
mailing list