[Dune] MPI error of PAAMG test on ubuntu 11.10

[Patrick Leidenberger]

Hi all,

on a fresh installed ubuntu 64bit 11.10 with gcc 4.6.1 and openmpi I get 
an error if I try to run the paamg test (see below).
Is someone out there working with ubuntu 11.10 and can try to run the 
paamg test?

Thanks a lot,

Patrick



~/dune/dune-istl/dune/istl/paamg/test$ mpirun -np 2 ./pamgtest
===================================================
BS=1 N=100 coarsenTarget=200
===================================================
BS=1 N=100 coarsenTarget=200
Level 0 has 10200 unknowns, 5100 unknowns per proc (procs=2)
aggregating finished.
Level 1 has 2500 unknowns, 1250 unknowns per proc (procs=2)
aggregating finished.
Level 2 has 620 unknowns, 310 unknowns per proc (procs=2)
aggregating finished.
Successive accumulation of data on coarse levels only works with 
ParMETIS installed.  Fell back to accumulation to one domain on coarsest 
level
Level 3 has 156 unknowns, 78 unknowns per proc (procs=2)
Filling holes took 0
  Communicating the receive information took 0
  Creating sends took 0
An MPI Error ocurred:
MPI_ERR_TRUNCATE: message truncated
terminate called after throwing an instance of 'MPIError'
[lucifer:15942] *** Process received signal ***
[lucifer:15942] Signal: Aborted (6)
[lucifer:15942] Signal code:  (-6)
[lucifer:15942] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x10060) 
[0x7f616d826060]
[lucifer:15942] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x35) 
[0x7f616d4ad3a5]
[lucifer:15942] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x17b) 
[0x7f616d4b0b0b]
[lucifer:15942] [ 3] 
/usr/lib/x86_64-linux-gnu/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x11d) 
[0x7f616dd04d7d]
[lucifer:15942] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xb9f26) 
[0x7f616dd02f26]
[lucifer:15942] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xb9f53) 
[0x7f616dd02f53]
[lucifer:15942] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xba04e) 
[0x7f616dd0304e]
[lucifer:15942] [ 7] 
./pamgtest(_Z15MPI_err_handlerPP19ompi_communicator_tPiz+0x192) [0x4d3a28]
[lucifer:15942] [ 8] /usr/lib/libmpi.so.0(ompi_errhandler_invoke+0x8b) 
[0x7f616e1f7d4b]
[lucifer:15942] [ 9] /usr/lib/libmpi.so.0(PMPI_Unpack+0x1c9) 
[0x7f616e2398b9]
[lucifer:15942] [10] ./pamgtest() [0x4d4e3b]
[lucifer:15942] [11] 
./pamgtest(_ZN4Dune18buildCommunicationINS_3Amg15PropertiesGraphINS1_11MatrixGraphIKNS_10BCRSMatrixINS_11FieldMatrixIdLi1ELi1EEESaIS6_EEEEENS1_16VertexPropertiesENS1_14EdgePropertiesENS_11IdentityMapESD_EEiiEEbRKT_RSt6vectorIiSaIiEERNS_29OwnerOverlapCopyCommunicationIT0_T1_EERPSP_RNS_21RedistributeInterfaceEb+0xd8a) 
[0x4f6bc5]
[lucifer:15942] [12] 
./pamgtest(_ZN4Dune16graphRepartitionINS_3Amg15PropertiesGraphINS1_11MatrixGraphIKNS_10BCRSMatrixINS_11FieldMatrixIdLi1ELi1EEESaIS6_EEEEENS1_16VertexPropertiesENS1_14EdgePropertiesENS_11IdentityMapESD_EEiiEEbRKT_RNS_29OwnerOverlapCopyCommunicationIT0_T1_EEiRPSL_RNS_21RedistributeInterfaceEb+0x58c) 
[0x4edd0c]
[lucifer:15942] [13] 
./pamgtest(_ZN4Dune3Amg30repartitionAndDistributeMatrixINS_10BCRSMatrixINS_11FieldMatrixIdLi1ELi1EEESaIS4_EEENS_29OwnerOverlapCopyCommunicationIiiEEKNS0_16CoarsenCriterionINS0_18SymmetricCriterionIS6_NS0_13FirstDiagonalEEEEEEEbRKT_RSF_RT0_RPSJ_RNS_23RedistributeInformationISJ_EEiRT1_+0xfe) 
[0x4e6b70]
[lucifer:15942] [14] 
./pamgtest(_ZN4Dune3Amg15MatrixHierarchyINS_26OverlappingSchwarzOperatorINS_10BCRSMatrixINS_11FieldMatrixIdLi1ELi1EEESaIS5_EEENS_11BlockVectorINS_11FieldVectorIdLi1EEESaISA_EEESC_NS_29OwnerOverlapCopyCommunicationIiiEEEESE_SaISC_EE5buildINS_9NegateSetINS_8EnumItemINS_28OwnerOverlapCopyAttributeSet12AttributeSetELi1EEEEENS0_16CoarsenCriterionINS0_18SymmetricCriterionIS7_NS0_13FirstDiagonalEEEEEEEvRKT0_+0x1d9d) 
[0x4e2233]
[lucifer:15942] [15] 
./pamgtest(_ZN4Dune3Amg3AMGINS_26OverlappingSchwarzOperatorINS_10BCRSMatrixINS_11FieldMatrixIdLi1ELi1EEESaIS5_EEENS_11BlockVectorINS_11FieldVectorIdLi1EEESaISA_EEESC_NS_29OwnerOverlapCopyCommunicationIiiEEEESC_NS_19BlockPreconditionerISC_SC_SE_NS_7SeqSSORIS7_SC_SC_Li1EEEEESE_SaISC_EEC2INS0_16CoarsenCriterionINS0_18SymmetricCriterionIS7_NS0_13FirstDiagonalEEEEEEERKSF_RKT_RKNS0_19DefaultSmootherArgsIdEEmmmbRKSE_+0x1ca) 
[0x4dc48e]
[lucifer:15942] [16] ./pamgtest(_Z7testAmgILi1EEvii+0x55e) [0x4d9d80]
[lucifer:15942] [17] 
./pamgtest(_ZN9AMGTesterILi1ELi1ELi1EE4testEii+0x1d) [0x4d8c70]
[lucifer:15942] [18] ./pamgtest(main+0x9d) [0x4d3b23]
[lucifer:15942] [19] 
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed) [0x7f616d49830d]
[lucifer:15942] [20] ./pamgtest() [0x4d36a9]
[lucifer:15942] *** End of error message ***
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 15942 on node lucifer exited 
on signal 6 (Aborted).
--------------------------------------------------------------------------
patrick at lucifer:~/dune/dune-istl/dune/istl/paamg/test$